DRSC/TRiP Functional Genomics Resources

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Protein Alignment slgA and Prodh1

DIOPT Version :9

Sequence 1:NP_001245796.1 Gene:slgA / 33117 FlyBaseID:FBgn0003423 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001129250.3 Gene:Prodh1 / 680409 RGDID:1590932 Length:599 Species:Rattus norvegicus


Alignment Length:613 Identity:278/613 - (45%)
Similarity:384/613 - (62%) Gaps:43/613 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VQPEVVSSETVKRSMKQESSQEKNPSP-----AGSPQRDPLD-VSFNDPIAAFKSKTTGELIRAY 137
            |.|.|.:..|..|:.:|..:   ||..     |....|.|:. |.|.:...|::|:.:.||.|..
  Rat    12 VAPRVAALSTKPRAQEQPPA---NPEALRGCGAAEAVRPPVPAVDFTNTQEAYRSRRSWELARNL 73

  Fly   138 LVYMICSSEKLVEHNMTLMKWSKNVLGQRLFTLLMKATFYGHFVAGEDQIKIIPTLERLRSFGVK 202
            ||..:|:|..|:.|:..|.:.::.:||||:|..|||.||||||||||||..|.|.:...::|||.
  Rat    74 LVLRLCASPVLLAHHEQLFQVARKLLGQRMFERLMKMTFYGHFVAGEDQESIRPLIRHNKAFGVG 138

  Fly   203 PILDYSVEEDITQEEAEKREVESSVSSA-----GDKKEEGSMPQYHVDKSFADRRYKVSSARTYF 262
            .||||.||||::.||||::|:||..|.|     |..|.|   .||.|..:|.|||..|.||||||
  Rat   139 FILDYGVEEDLSPEEAERKEMESCTSEAERDGSGANKRE---KQYQVHPAFGDRRDGVISARTYF 200

  Fly   263 YLNEATCERNMEIFIKCLEAVSDDDRKAPRAVATGATFGTGITAIKLTALGRPQLLLQLSEVIMR 327
            |.:||.|:..||..::|:||            :.||:.| |.:|||||||||||.|||.|:|:.|
  Rat   201 YASEAKCDNYMENLLQCIEA------------SGGASDG-GFSAIKLTALGRPQFLLQFSDVLTR 252

  Fly   328 TRKYMEDMVGGQGN----VLTHHKTIKDLEKYYATLG--DNKDVKEFLNNVTSDKEGILHLFPWS 386
            .|::...|...||.    .:.....:..|::..|.:|  ...:::.:....|....|.:.|..|:
  Rat   253 WRQFFHQMAAEQGQAGRPAVDTKLEVAVLQESIAKMGISSRAEIERWFTPETLGVSGTVDLLDWN 317

  Fly   387 GIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADLDVRIMVDAEQ 451
            .::|..:|||....||:.||||:..|:|:...:||:..:.|::|::.:.|.|.:..||:|:||||
  Rat   318 SLIDSRTQLSRHLVVPNVQTGQLEPLLSRFTEEEEQQMKRMLQRMDVLAKVAREAGVRLMIDAEQ 382

  Fly   452 TYFQPAISRITLEMMRKYNKDKAIVFNTYQCYLRETFREVNTDLEQAKRQNFYFGAKLVRGAYMD 516
            :||||||||:||||.|::|.||..:|||:||||::.:..|..|:|.::|:.:.|||||||||||.
  Rat   383 SYFQPAISRLTLEMQRRFNVDKPFIFNTFQCYLKDAYDNVTIDMELSRREGWCFGAKLVRGAYMA 447

  Fly   517 QERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIKLMKDCDDDARKIGIMVASHNEDTVRFA 581
            |||.||..:||.||:|||:|||..||||.|:..|..:|       .:.|..:||||||||||.|.
  Rat   448 QERARAVEIGYEDPINPTYEATNAMYHRCLNYVLEELK-------HSTKAEVMVASHNEDTVSFT 505

  Fly   582 IQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVEEVLPYLSRRAQENKGV 646
            :.:|||:|:.|.|..:||||||||||.|:|||||||:..|||:|||||.||||||||||.||..:
  Rat   506 LCRMKELGLHPADGQVCFGQLLGMCDQISFPLGQAGFPVYKYVPYGPVMEVLPYLSRRALENSSI 570

  Fly   647 LKKIKKEKRLLLSEIRRRLMRGQLFYKP 674
            :|..::|::||..|:.|||..|.||:.|
  Rat   571 MKGAQRERQLLWQELCRRLRTGSLFHHP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slgANP_001245796.1 PLN02681 93..668 CDD:215366 269/591 (46%)
Pro_dh 417..653 CDD:279895 130/235 (55%)
Prodh1NP_001129250.3 PLN02681 47..594 CDD:215366 265/569 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344447
Domainoid 1 1.000 355 1.000 Domainoid score I961
eggNOG 1 0.900 - - E1_COG0506
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40764
Inparanoid 1 1.050 506 1.000 Inparanoid score I1282
OMA 1 1.010 - - QHG53936
OrthoDB 1 1.010 - - D392857at33208
OrthoFinder 1 1.000 - - FOG0001607
OrthoInspector 1 1.000 - - oto95932
orthoMCL 1 0.900 - - OOG6_101295
Panther 1 1.100 - - LDO PTHR13914
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1170
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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