DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slgA and Prodh2

DIOPT Version :9

Sequence 1:NP_001245796.1 Gene:slgA / 33117 FlyBaseID:FBgn0003423 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_062419.2 Gene:Prodh2 / 56189 MGIID:1929093 Length:456 Species:Mus musculus


Alignment Length:550 Identity:170/550 - (30%)
Similarity:258/550 - (46%) Gaps:132/550 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 AFKSKTTGELIRAYLVYMICSSEKLVEHNMTLMKWSKNVLGQRLFTLLMKATFYGHFVAGEDQIK 188
            ||..|.|.||.||.||..:|:...||.|.:....||:.:||.||...|::|:.||.|||||...:
Mouse    28 AFHVKGTAELARALLVLRLCAWPPLVTHGLAFQAWSQRLLGSRLSGALLRASIYGQFVAGETAEE 92

  Fly   189 IIPTLERLRSFGVKPILDYSVEEDITQEEAEKREVESSVSSAGDKKEEGSMPQYHVDKSFADRRY 253
            :...:.:|::.|::|:|....||:                           |.            
Mouse    93 VRNCVGQLQALGLQPLLAVPTEEE---------------------------PD------------ 118

  Fly   254 KVSSARTYFYLNEATCERNMEIFIKCLE---AVSDDDRKAPRAVATGATFGTGITAIKLTALGRP 315
              |:|:|    :|...|.|:...::|::   |:.|....|..:          :..:|:|||...
Mouse   119 --STAKT----SEVWYEENLSAMLRCVDLSRALVDAHGPARNS----------LMQLKVTALAST 167

  Fly   316 QLLLQLSEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATLGDNKDVKEFLNNVTSDKEGIL 380
            :|..:||..|.|.|                                                   
Mouse   168 RLCKELSAWIQRPR--------------------------------------------------- 181

  Fly   381 HLFPWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADLDVRI 445
                      ..|:||.. |:.:.........:|.:..::.:..:..:.||:.:.:.|....||:
Mouse   182 ----------GSSELSPE-RLAEAMDSGRNLQLSCLSTEQNQHLQASLSRLHRVAQHARAKCVRL 235

  Fly   446 MVDAEQTYFQPAISRITLEMMRKYNKDK---AIVFNTYQCYLRETFREVNTDLEQAKRQNFYFGA 507
            :||||.|:..||:|.:...:..::|..:   ..|:||||.||::|.:.:..|.|.|.:....||.
Mouse   236 LVDAEYTFINPALSLLVAALAVRWNSPEEGGPWVWNTYQAYLKDTHQRLEQDAEAAHKAGLAFGV 300

  Fly   508 KLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIKLMKDC-DDDARKIGIMVA 571
            |||||||:|:||...:..|..|...|.:|||:    |:.|.||   :||..| .:......:|||
Mouse   301 KLVRGAYLDKERSMTQLQGKEDCTQPDYEATS----RSYSRCL---ELMLRCVSNHGPPCHLMVA 358

  Fly   572 SHNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVEEVLPYL 636
            ||||::||.|.::|.|:|| |.|..:||||||||||:::..||||||..||.||||.:|||:|||
Mouse   359 SHNEESVRQATKRMWELGI-PLDGPVCFGQLLGMCDHVSLALGQAGYMVYKSIPYGCLEEVIPYL 422

  Fly   637 SRRAQENKGVLKKIKKEKRLLLSEIRRRLM 666
            .||||||:.||:..::|:.||..|:.|||:
Mouse   423 IRRAQENRSVLQGARREQALLSQELWRRLL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slgANP_001245796.1 PLN02681 93..668 CDD:215366 170/549 (31%)
Pro_dh 417..653 CDD:279895 102/239 (43%)
Prodh2NP_062419.2 Pro_dh 218..439 CDD:279895 102/228 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0506
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53936
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001607
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101295
Panther 1 1.100 - - O PTHR13914
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R983
SonicParanoid 1 1.000 - - X1170
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.850

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