DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slgA and Prodh2

DIOPT Version :9

Sequence 1:NP_001245796.1 Gene:slgA / 33117 FlyBaseID:FBgn0003423 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001033677.1 Gene:Prodh2 / 361538 RGDID:1306761 Length:456 Species:Rattus norvegicus


Alignment Length:549 Identity:173/549 - (31%)
Similarity:265/549 - (48%) Gaps:130/549 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 AFKSKTTGELIRAYLVYMICSSEKLVEHNMTLMKWSKNVLGQRLFTLLMKATFYGHFVAGEDQIK 188
            ||..|.|.||.||.||..:|:...||.|.:....||:.:||.||...|::|:.||.|||||...:
  Rat    28 AFHLKRTAELARALLVLRLCAWPPLVTHGLAFQAWSQRLLGSRLSGALLRASIYGQFVAGETAEE 92

  Fly   189 IIPTLERLRSFGVKPILDYSVEEDITQEEAEKREVESSVSSAGDKKEEGSMPQYHVDKSFADRRY 253
            :...:::|::.|::|:|....||:                           |.            
  Rat    93 VRGCVQQLQAIGLQPLLAVPTEEE---------------------------PD------------ 118

  Fly   254 KVSSARTYFYLNEATCERNMEIFIKCLE---AVSDDDRKAPRAVATGATFGTGITAIKLTALGRP 315
              |:|:|    :||..|.|:...:.|::   ||:|....|..:          :..:|:|||..|
  Rat   119 --SAAKT----SEAWYEGNLSAMLHCVDLSRAVADAHGPARNS----------LMQLKVTALTSP 167

  Fly   316 QLLLQLSEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATLGDNKDVKEFLNNVTSDKEGIL 380
            :|..:||..|.|.|                                                |..
  Rat   168 RLCKELSAWIQRPR------------------------------------------------GSS 184

  Fly   381 HLFPWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADLDVRI 445
            .|.|        .:|::..     ::|:..:| |.:..::.:..:..:.||:.:.:.|...|||:
  Rat   185 ELRP--------ERLAEAM-----ESGRNLQL-SCLSTEQNQHLQASLSRLHRVAQHARAQDVRL 235

  Fly   446 MVDAEQTYFQPAISRITLEMMRKYN---KDKAIVFNTYQCYLRETFREVNTDLEQAKRQNFYFGA 507
            :||||.|:..||:|.:...:..::|   ::...|:||||.||::|...:..|.:.|......||.
  Rat   236 LVDAEYTFINPALSLLVAALAMRWNSSEEEGPWVWNTYQAYLKDTHERLERDAKAAHEAGLAFGV 300

  Fly   508 KLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIKLMKDCDDDARKIGIMVAS 572
            |||||||:|:||...:..|..|...|.:|||:..|.|.|...|||:      .:...:..:||||
  Rat   301 KLVRGAYLDKERSVTQLHGKEDCTQPDYEATSRSYSRCLELMLRRV------SNHGPRCHLMVAS 359

  Fly   573 HNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVEEVLPYLS 637
            |||:::|.|.::|.|:|| |.|..:||||||||||:::..||||||..||.||||.:|||:|||.
  Rat   360 HNEESIRQATRRMWELGI-PLDGPVCFGQLLGMCDHVSLALGQAGYMVYKSIPYGCLEEVIPYLI 423

  Fly   638 RRAQENKGVLKKIKKEKRLLLSEIRRRLM 666
            ||||||:.||:..::|:.||..|:.|||:
  Rat   424 RRAQENRSVLQGARREQALLSQELWRRLL 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slgANP_001245796.1 PLN02681 93..668 CDD:215366 173/549 (32%)
Pro_dh 417..653 CDD:279895 100/238 (42%)
Prodh2NP_001033677.1 PLN02681 28..453 CDD:215366 173/549 (32%)
Pro_dh 218..439 CDD:279895 100/227 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53936
OrthoDB 1 1.010 - - D392857at33208
OrthoFinder 1 1.000 - - FOG0001607
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101295
Panther 1 1.100 - - O PTHR13914
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1170
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.930

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