DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slgA and Prodh

DIOPT Version :9

Sequence 1:NP_001245796.1 Gene:slgA / 33117 FlyBaseID:FBgn0003423 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_035302.2 Gene:Prodh / 19125 MGIID:97770 Length:599 Species:Mus musculus


Alignment Length:622 Identity:280/622 - (45%)
Similarity:385/622 - (61%) Gaps:61/622 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VQPEVVSSETVKRSMKQESSQEKNPSPAGSPQ-----------RDPLD-VSFNDPIAAFKSKTTG 131
            |.|.|.:..|..::.:|         |..||:           |.|:. |.|.:...|::|:.:.
Mouse    12 VAPRVAALSTKPQAQEQ---------PPASPEALRGCGAAKAVRPPVPAVDFTNTQEAYRSRRSW 67

  Fly   132 ELIRAYLVYMICSSEKLVEHNMTLMKWSKNVLGQRLFTLLMKATFYGHFVAGEDQIKIIPTLERL 196
            ||:|..||..:|:|..|:.|:..|.:.::.:||||:|..|||.||||||||||||..|.|.:...
Mouse    68 ELVRNLLVLRLCASPVLLAHHEQLFQVARKLLGQRMFERLMKMTFYGHFVAGEDQESIRPLIRHN 132

  Fly   197 RSFGVKPILDYSVEEDITQEEAEKREVESSVSSA-----GDKKEEGSMPQYHVDKSFADRRYKVS 256
            ::|||..||||.||||::.||||::|:||..|.|     |..|.|   .||.|..:|.|||..|.
Mouse   133 KAFGVGFILDYGVEEDLSPEEAERKEMESCTSEAERDGSGANKRE---KQYQVHPAFGDRRDGVI 194

  Fly   257 SARTYFYLNEATCERNMEIFIKCLEAVSDDDRKAPRAVATGATFGTGITAIKLTALGRPQLLLQL 321
            |||||||.|||.|:..||..::|::|            :.||:.| |.:|||||||||||.|||.
Mouse   195 SARTYFYANEAKCDNYMENLLQCIKA------------SGGASDG-GFSAIKLTALGRPQFLLQF 246

  Fly   322 SEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATLGDN---------KDVKEFLNNVTSDKE 377
            |:|:.|.|::...|...||..   .:...|.:...|.|.|:         .:::.:....|....
Mouse   247 SDVLTRWRRFFHQMAAEQGQA---GRAAVDTKLEVAVLQDSIAKMGIASRAEIEGWFTPETLGVS 308

  Fly   378 GILHLFPWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMFRNMIRRLNTIVKAAADLD 442
            |.:.|..|:.::|..::||....||:.||||:..|:|:...:||:..:.|::|::.:.|.|.:..
Mouse   309 GTVDLLDWNSLIDSRTRLSRHLVVPNVQTGQLEPLLSRFTEEEEQQMKRMLQRMDVLAKKAKEAG 373

  Fly   443 VRIMVDAEQTYFQPAISRITLEMMRKYNKDKAIVFNTYQCYLRETFREVNTDLEQAKRQNFYFGA 507
            ||:|:||||:||||||||:||||.|::|.||..:|||:||||::.:..|..|:|.|:|:.:.|||
Mouse   374 VRLMIDAEQSYFQPAISRLTLEMQRRFNVDKPFIFNTFQCYLKDAYDNVTLDMELARREGWCFGA 438

  Fly   508 KLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIKLMKDCDDDARKIGIMVAS 572
            ||||||||.|||.||..:||.||:|||:|||..||||.|:..|..:|       .:.|..:||||
Mouse   439 KLVRGAYMAQERVRAAEIGYEDPINPTYEATNAMYHRCLNYVLEELK-------HSTKAEVMVAS 496

  Fly   573 HNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQAGYSAYKYIPYGPVEEVLPYLS 637
            ||||||.|.:.:|||||:.|.|..:||||||||||.|:|||||||:..|||:|||||.|||||||
Mouse   497 HNEDTVHFTLCRMKEIGLHPADGQVCFGQLLGMCDQISFPLGQAGFPVYKYVPYGPVMEVLPYLS 561

  Fly   638 RRAQENKGVLKKIKKEKRLLLSEIRRRLMRGQLFYKP 674
            |||.||..::|..::|::||..|:||||..|.||:.|
Mouse   562 RRALENSSIMKGAQRERQLLWQELRRRLRTGSLFHHP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slgANP_001245796.1 PLN02681 93..668 CDD:215366 272/600 (45%)
Pro_dh 417..653 CDD:279895 132/235 (56%)
ProdhNP_035302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..39 5/27 (19%)
PLN02681 47..594 CDD:215366 268/572 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..180 12/30 (40%)
Pro_dh 343..570 CDD:279895 133/233 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841028
Domainoid 1 1.000 356 1.000 Domainoid score I978
eggNOG 1 0.900 - - E1_COG0506
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40764
Inparanoid 1 1.050 509 1.000 Inparanoid score I1312
Isobase 1 0.950 - 0 Normalized mean entropy S2467
OMA 1 1.010 - - QHG53936
OrthoDB 1 1.010 - - D392857at33208
OrthoFinder 1 1.000 - - FOG0001607
OrthoInspector 1 1.000 - - oto92363
orthoMCL 1 0.900 - - OOG6_101295
Panther 1 1.100 - - LDO PTHR13914
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R983
SonicParanoid 1 1.000 - - X1170
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

Return to query results.
Submit another query.