DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slgA and prodh2

DIOPT Version :9

Sequence 1:NP_001245796.1 Gene:slgA / 33117 FlyBaseID:FBgn0003423 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_031748690.1 Gene:prodh2 / 101734436 -ID:- Length:465 Species:Xenopus tropicalis


Alignment Length:568 Identity:184/568 - (32%)
Similarity:275/568 - (48%) Gaps:134/568 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 NPSPAGSPQ-RDPLDVSFNDPIAAFKSKTTGELIRAYLVYMICSSEKLVEHNMTLMKWSKNVLGQ 165
            :|....:|: :.||  :|:|. ..||.|:..|:.|..|::.:||...||.|:..:|..|:.:||:
 Frog    28 SPHSTAAPRAQGPL--TFSDG-GVFKLKSNWEVARGLLIFRVCSFPSLVRHSEKMMAVSRRLLGR 89

  Fly   166 RLFTLLMKATFYGHFVAGEDQIKIIPTLERLRSFGVKPILDYSVEEDITQEEAEKREVESSVSSA 230
            |||...||.:.||.|||||...:|...:||||..|::|:|...:|||:.|.::.:|         
 Frog    90 RLFEWGMKGSVYGQFVAGETLPEIRECVERLRQLGIRPMLAVPIEEDLGQAKSGER--------- 145

  Fly   231 GDKKEEGSMPQYHVDKSFADRRYKVSSARTYFYLNEATCERNMEIFIKCLE-AVSDDDRKAPRAV 294
                                           :|      ::|..:.:.|:: :.:..||.     
 Frog   146 -------------------------------WY------QQNETVMLDCVDLSAAGGDRP----- 168

  Fly   295 ATGATFGTGITAIKLTALGRPQLLLQLSEVIMRTRKYMEDMVGGQGNVLTHHKTIKDLEKYYATL 359
                     :..:|:|||....|...||..:...               ||...:..        
 Frog   169 ---------MMQLKITALMSADLCKLLSVHLSHP---------------THRPQLCP-------- 201

  Fly   360 GDNKDVKEFLNNVTSDKEGILHLFPWSGIVDEDSQLSDTFRVPDPQTGQMRRLISQIPPKEEEMF 424
                      ..:.|..||....||:         ||:.                     |....
 Frog   202 ----------TRLVSIMEGEESAFPF---------LSEA---------------------ENTHL 226

  Fly   425 RNMIRRLNTIVKAAADLDVRIMVDAEQTYFQPAISRITLEMMRKYNKDKAIVFNTYQCYLRETFR 489
            ||.:|||:.|.|.|....||::||||.||..||:|.:|:.||.:.|:.:..::|||||||:::|.
 Frog   227 RNSLRRLSRIAKHATANRVRVLVDAEYTYMNPALSLVTMAMMAQCNQSEPWIWNTYQCYLKDSFS 291

  Fly   490 EVNTDLEQAKRQNFYFGAKLVRGAYMDQERDRAKSLGYPDPVNPTFEATTDMYHRTLSECLRRIK 554
            .::.||.:|:.....||.|||||||||:||..|:..|||||:...:|||...|.|:|.:.|..| 
 Frog   292 LLSLDLGRAESLGLCFGVKLVRGAYMDKERKLAQQKGYPDPIQQDWEATNQSYQRSLDKMLDLI- 355

  Fly   555 LMKDCDDDARKIGIMVASHNEDTVRFAIQQMKEIGISPEDKVICFGQLLGMCDYITFPLGQAGYS 619
                 ..:.::..::||||||::|..|:.:|.|:||......:.|||||||||:::..|||||:.
 Frog   356 -----GQNGQRYNLIVASHNEESVLHAVARMAELGIERGSGSVSFGQLLGMCDHVSLTLGQAGFL 415

  Fly   620 AYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLMR 667
            .||.:|||.|..|||||.||||||:.||:.|:||:.||..|::|||.|
 Frog   416 VYKSLPYGSVNSVLPYLIRRAQENQSVLQGIRKERDLLRWELKRRLFR 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slgANP_001245796.1 PLN02681 93..668 CDD:215366 184/568 (32%)
Pro_dh 417..653 CDD:279895 108/235 (46%)
prodh2XP_031748690.1 PLN02681 23..463 CDD:215366 183/566 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D392857at33208
OrthoFinder 1 1.000 - - FOG0001607
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1170
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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