DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and CDC11

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_012610.1 Gene:CDC11 / 853539 SGDID:S000003837 Length:415 Species:Saccharomyces cerevisiae


Alignment Length:375 Identity:144/375 - (38%)
Similarity:218/375 - (58%) Gaps:46/375 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RKSVKKGFEFTLMVVGESGLGKSTLVNSLF---LTDLYPERIIPDAIEKQKQTVKLEASTVEIE- 87
            ||.:|:|..||:|:||:||.|:||.:|:|.   :.|.....::|.....:.. ::|...|||:| 
Yeast    14 RKHLKRGITFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEID-LQLREETVELED 77

  Fly    88 ERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNRRN--IVDNRIHCCFYF 150
            :.|||::|.::|||||||::|||.||..|.:||..||:..|.:||.: |||  ..|.|:|||.|.
Yeast    78 DEGVKIQLNIIDTPGFGDSLDNSPSFEIISDYIRHQYDEILLEESRV-RRNPRFKDGRVHCCLYL 141

  Fly   151 ISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIKIYPLP-DC 214
            |:|.|||||.:||||:::|.|.|||:|||:|:|.||:.|:...|..||::|:...:.||..| |.
Yeast   142 INPTGHGLKEIDVEFIRQLGSLVNIIPVISKSDSLTRDELKLNKKLIMEDIDRWNLPIYNFPFDE 206

  Fly   215 DSDEDEDYKEQVKQLKEAVPFAVCGANTLLEVKGK--KVRGRLYPWGVVEVENPDHCDFIKLR-T 276
            |...||||:..: .|:..:|||:.|:|.:.|:.|.  .:|||.||||:::||:....||:.|| .
Yeast   207 DEISDEDYETNM-YLRTLLPFAIIGSNEVYEMGGDVGTIRGRKYPWGILDVEDSSISDFVILRNA 270

  Fly   277 MLITHMQDLQEVTQEVHYENYRSDRL------AKGIKGKENGVKAERDSSSQV------------ 323
            :||:|:.||:..|.|:.||.||::.|      |:.|  :.|..|....|||..            
Yeast   271 LLISHLHDLKNYTHEILYERYRTEALSGESVAAESI--RPNLTKLNGSSSSSTTTRRNTNPFKQS 333

  Fly   324 --VSNSVL-----------GEKDRILQEKEAELRRMQEMLAQMQARMQAQ 360
              ::|.||           ||.:.....:|.::|..:|.|...:.|:|.:
Yeast   334 NNINNDVLNPASDMHGQSTGENNETYMTREEQIRLEEERLKAFEERVQQE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 139/355 (39%)
Septin 32..304 CDD:279124 123/287 (43%)
CDC11NP_012610.1 CDC3 5..413 CDD:227352 144/375 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S763
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.820

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