DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sep1 and Septin6

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_017457646.1 Gene:Septin6 / 691335 RGDID:1585082 Length:490 Species:Rattus norvegicus


Alignment Length:350 Identity:149/350 - (42%)
Similarity:216/350 - (61%) Gaps:32/350 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SIETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEKQ 73
            ::...|:|||.:||:|:..|||.:||.|.::.|||:|||||||:::||.|....|     .....
  Rat    72 TVPLAGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGKSTLMDTLFNTKFEGE-----PTTHT 131

  Fly    74 KQTVKLEASTVEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNR-- 136
            :..|:|.:||.:::|..|.|:||:|.|.||||.|:..:|:..|:|:||.|:|.:|::|..:.|  
  Rat   132 QPGVQLRSSTYDLQESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVL 196

  Fly   137 RNIVDNRIHCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEI 201
            .:..|:|||.|.|||:|.||.||.||:..||||.|||||:|:|||:|.::|.|:.:.|.:|..|:
  Rat   197 HSYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKSDAISKSELAKFKIKITSEL 261

  Fly   202 ESHGIKIYPLPDCDSDEDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENP 266
            .|:|::||..|    .:||...|....:...:||||.|:...:::..|.:|.|.||||.|:|||.
  Rat   262 VSNGVQIYQFP----TDDESVAEINGTMNAHLPFAVVGSTEEVKIGNKMMRARQYPWGTVQVENE 322

  Fly   267 DHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSDRLAKGIKGKENGVKAERDSSSQVVS----- 325
            .||||:|||.||| .:|:||:|.|...|||.||..:|      :|.|.| :.|..|:..|     
  Rat   323 AHCDFVKLREMLIRINMEDLREQTHARHYELYRRCKL------EEMGFK-DTDPDSKPFSLQETY 380

  Fly   326 ----NSVLGEKDRILQEKEAELRRM 346
                |..|||    ||:||.|:|:|
  Rat   381 EAKRNEFLGE----LQKKEEEMRQM 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 146/340 (43%)
Septin 32..304 CDD:279124 122/274 (45%)
Septin6XP_017457646.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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