DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and Septin3

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_038935716.1 Gene:Septin3 / 56003 RGDID:621745 Length:839 Species:Rattus norvegicus


Alignment Length:302 Identity:148/302 - (49%)
Similarity:212/302 - (70%) Gaps:11/302 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEKQKQTVK 78
            ||:|...:..|:.:|::|.||:|.:||||:||||||||||:||.:.:..:....:..||..:||:
  Rat   521 GYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVE 585

  Fly    79 LEASTVEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNR-RNIVDN 142
            ::|....|||.|||::|||:|||||||.|:|.|.:..|.:||:||||:||::|..:.| :.|.|.
  Rat   586 IKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDT 650

  Fly   143 RIHCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIK 207
            |:|||.|||||.||.|:|||:||||.|...||::|||||||.:|.:|....|.|:.:|:|.:||:
  Rat   651 RVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNVIPVIAKADTMTLEEKSEFKQRVRKELEVNGIE 715

  Fly   208 IYPLPDCDSD-EDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPDHCDF 271
            .||..:.|.| ||:...::::|  |::||||.|::...:|.||:|.||..|||::||||.:||:|
  Rat   716 FYPQKEFDEDLEDKTENDKIRQ--ESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEF 778

  Fly   272 IKLRTMLI-THMQDLQEVTQEVHYENYRSDRLAKGIKGKENG 312
            ..||..:| ||:|||:|||..:|||.||:.||      .:||
  Rat   779 ALLRDFVIRTHLQDLKEVTHNIHYETYRAKRL------NDNG 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 148/302 (49%)
Septin 32..304 CDD:279124 140/274 (51%)
Septin3XP_038935716.1 CDC_Septin 540..814 CDD:206649 140/281 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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