DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and spn3

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001342704.1 Gene:spn3 / 2540029 PomBaseID:SPBC16A3.01 Length:412 Species:Schizosaccharomyces pombe


Alignment Length:382 Identity:149/382 - (39%)
Similarity:213/382 - (55%) Gaps:47/382 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TKGFSSIETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPD 68
            |||...||         |..:..:||.|||....|||||:.|||::..:|:|....|        
pombe    30 TKGQIDIE---------LTMRTTKKSSKKGIPLNLMVVGDVGLGRTAFINTLCEKPL-------- 77

  Fly    69 AIEKQKQTVKLEASTVE-----------IEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDE 122
             |.........|||:|.           |.|.|.|:.|||:|||.||:||||.|:|..||:||:.
pombe    78 -IRHNNNFDPAEASSVSPVEIVPYQTDIILEDGTKINLTVLDTPHFGEAIDNENNFDIILQYIES 141

  Fly   123 QYERFLRDESGLNRR-NIVDNRIHCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLT 186
            ||:..|.:||.:.|. ...|:|:|...|||||.||||:.||:|.|::|..:|||:|.|||||.||
pombe   142 QYDNVLEEESRIKRNARFCDDRVHALIYFISPTGHGLRELDIELMRRLAPRVNIIPAIAKADSLT 206

  Fly   187 KKEILRLKCRIMQEIESHGIKIYPLPDCDSDEDEDYKEQV-KQLKEAVPFAVCGANTLLEVKGKK 250
            .:|:...|..|..:||.:.|.:|..| .|.:|||:....: :||:..:|||:..::.|:|:.|:.
pombe   207 AQELQTTKEMINADIEYYKIPVYDFP-YDIEEDEEAIINLSQQLRATIPFAIVSSDRLIEMNGQT 270

  Fly   251 VRGRLYPWGVVEVENPDHCDFIKLRTMLI-THMQDLQEVTQEVHYENYRSDRLAK---------G 305
            ||||.||||||||:||.|.||:.||:.|. ||::||..:|....||.||:::|:.         |
pombe   271 VRGRAYPWGVVEVDNPRHSDFLALRSALFATHIEDLHNITSNQLYETYRTEKLSTSQLLLDSTVG 335

  Fly   306 IKGK-----ENGVKAERDSSSQVVSNSVLGEKDRILQEKEAELRRMQEMLAQMQARM 357
            :.||     :..::.:|..:.::.....:.||.|.|..:|..||.::|.||...|.|
pombe   336 LDGKNLSQHDQVLREDRLRAIELSVQKEIEEKRRQLLAREEALRALEEKLAASTAAM 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 137/356 (38%)
Septin 32..304 CDD:279124 124/285 (44%)
spn3NP_001342704.1 Septin 50..325 CDD:307057 123/284 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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