DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and spn6

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001342876.1 Gene:spn6 / 2538950 PomBaseID:SPCC188.12 Length:380 Species:Schizosaccharomyces pombe


Alignment Length:349 Identity:126/349 - (36%)
Similarity:204/349 - (58%) Gaps:31/349 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEK-QKQTVKLEAST 83
            :||::......:|....|:|:.|.||.||:|..|:||.|.|.||:....|.|. .|:|::::.:.
pombe    15 SLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKNK 79

  Fly    84 VEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFL-RDESGLN--RRNIVDNRIH 145
            ..|||.|..:.|||:|||||||.|||::.:..:.||:|||:||:| .|::.|.  |:   |.|:|
pombe    80 AVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRK---DTRVH 141

  Fly   146 CCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIKIYP 210
            .|.|||:|...|:.||||..||:|.:.||:||||||||..|..|:.::|.:|.:.:|:..|.::.
pombe   142 VCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQSIDVFH 206

  Fly   211 LPDCDSDEDEDYKEQVKQLKEAVPFAVCGA-NTLLEVKGKKVRGRLYPWGVVEVENPDHCDFIKL 274
                .|.|..|| |..:.|..::|:|:..: |.:.:..|:|.:||.||||..|:....||||:||
pombe   207 ----PSTEYSDY-ETAELLDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFLKL 266

  Fly   275 RTMLIT-HMQDLQEVTQEVHYENYRSDRLAKGIKGKENGV-KAERDSSSQVVSNSVLGEKDRILQ 337
            :.:||. ||.:|...|:...||.||.::|.    .:::|: |.:::            ..:|:..
pombe   267 KKLLINRHMLELINTTETNIYERYRREQLT----NRKSGIPKLKKE------------HYERLNN 315

  Fly   338 EKEAELRRMQEMLAQMQARMQAQQ 361
            ||.|..:::.:|..:.::..||::
pombe   316 EKRAIQQKITQMTNETESFFQAKE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 122/328 (37%)
Septin 32..304 CDD:279124 115/277 (42%)
spn6NP_001342876.1 CDC3 17..375 CDD:227352 125/347 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 233 1.000 Domainoid score I490
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.880

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