DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and Septin5

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_446383.4 Gene:Septin5 / 116728 RGDID:621763 Length:378 Species:Rattus norvegicus


Alignment Length:360 Identity:212/360 - (58%)
Similarity:274/360 - (76%) Gaps:28/360 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEKQKQTVKL 79
            |||||.||||||||||||||:|||||.|||||||||||:||||||||.:|.:..|.|:..|||::
  Rat    33 YVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVHSLFLTDLYKDRKLLSAEERINQTVEI 97

  Fly    80 EASTVEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNRRNIVDNRI 144
            ...||:|||:||||:||:|||||||||::|...:..|.:|:|:|:|::.||||||||:||.|||:
  Rat    98 LKHTVDIEEKGVKLKLTIVDTPGFGDAVNNFECWKPITDYVDQQFEQYFRDESGLNRKNIQDNRV 162

  Fly   145 HCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIKIY 209
            |||.||||||||||:|:||.|||.||.||||||:|||||||...||.:||.||.:||:..||.:|
  Rat   163 HCCLYFISPFGHGLRPVDVGFMKALHEKVNIVPLIAKADCLVPSEIRKLKDRIREEIDKFGIHVY 227

  Fly   210 PLPDCDSDEDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPDHCDFIKL 274
            ..|:||||||||:|:|.::|||:.||||.|:||::|.||::|||||||||:|||||..||||:||
  Rat   228 QFPECDSDEDEDFKQQDRELKESAPFAVIGSNTVVEAKGQRVRGRLYPWGIVEVENQAHCDFVKL 292

  Fly   275 RTMLI-THMQDLQEVTQEVHYENYRSDRLAKGIKGKENGVKAERDSSSQVVSNSVL--------- 329
            |.||| |||.||::||.:|||||||:..:              :..:|::..:|.:         
  Rat   293 RNMLIRTHMHDLKDVTCDVHYENYRAHCI--------------QQMTSKLTQDSRMESPIPILPL 343

  Fly   330 ----GEKDRILQEKEAELRRMQEMLAQMQARMQAQ 360
                .|.:::::.|:.|||||||||.:|:.:||.|
  Rat   344 PTPDSETEKLIRMKDEELRRMQEMLQKMKQQMQDQ 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 199/340 (59%)
Septin 32..304 CDD:279124 179/272 (66%)
Septin5NP_446383.4 CDC3 32..360 CDD:227352 199/340 (59%)
Septin 50..322 CDD:279124 179/285 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X204
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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