DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep1 and septin3

DIOPT Version :9

Sequence 1:NP_523430.1 Gene:Sep1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_012816920.1 Gene:septin3 / 100488721 XenbaseID:XB-GENE-1002286 Length:616 Species:Xenopus tropicalis


Alignment Length:314 Identity:153/314 - (48%)
Similarity:216/314 - (68%) Gaps:15/314 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEKQKQTVK 78
            ||:|...:..|:.:|::|.||:|.:||||:||||||||||:||.:.:..:.......:|..:||:
 Frog   306 GYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFKSQVSRKSAGWSRDDKIPKTVE 370

  Fly    79 LEASTVEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNR-RNIVDN 142
            :::.:..|||.|||::|||||||||||.|:|.|.:..|.::|:||||:||::|..:.| :.|.|.
 Frog   371 IKSISHVIEEGGVKMKLTVVDTPGFGDQINNENCWEPIEKFINEQYEKFLKEEVNIARKKRIPDT 435

  Fly   143 RIHCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIK 207
            |:|||.|||||.||.|:|||:||||.|...|||:|||||||.:|.:|....|.|:.:|:|.:||:
 Frog   436 RVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKTEFKQRVRKELEVNGIE 500

  Fly   208 IYPLPDCDSD-EDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPDHCDF 271
            .||..:.|.| ||:...::::|  |::||||.|::...:|.||:|.||..|||:|||||..||:|
 Frog   501 FYPQKEFDDDLEDKTENDKIRQ--ESMPFAVVGSDKEYQVNGKRVLGRKTPWGIVEVENLAHCEF 563

  Fly   272 IKLRTMLI-THMQDLQEVTQEVHYENYRSDRLAKGIKGKENG----VKAERDSS 320
            ..||..:| ||:|||:|||..:|||.||:.||      .|||    |.||.:.|
 Frog   564 SLLRDFVIRTHLQDLKEVTHNIHYETYRAKRL------NENGGLPPVSAENEES 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep1NP_523430.1 CDC3 13..342 CDD:227352 153/314 (49%)
Septin 32..304 CDD:279124 140/274 (51%)
septin3XP_012816920.1 CDC3 305..>595 CDD:227352 144/290 (50%)
CDC_Septin 325..599 CDD:206649 141/281 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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