DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Septin1 and septin4

DIOPT Version :10

Sequence 1:NP_523430.1 Gene:Septin1 / 33114 FlyBaseID:FBgn0011710 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_002933653.2 Gene:septin4 / 100485625 XenbaseID:XB-GENE-983580 Length:634 Species:Xenopus tropicalis


Alignment Length:355 Identity:206/355 - (58%)
Similarity:273/355 - (76%) Gaps:8/355 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFLTDLYPERIIPDAIEKQKQTVKL 79
            |||||.||||:|||.|||||||||||.||||||||||:|||||||||.:|.|....|:..|||::
 Frog   280 YVGFATLPNQMHRKYVKKGFEFTLMVAGESGLGKSTLINSLFLTDLYRDRHILSPEERVTQTVEI 344

  Fly    80 EASTVEIEERGVKLRLTVVDTPGFGDAIDNSNSFGAILEYIDEQYERFLRDESGLNRRNIVDNRI 144
            ...||:|:|:||:||||||||||:||||:|...:..:.:|||:|:|::.||||||||||:.|.|:
 Frog   345 VKQTVDIQEKGVRLRLTVVDTPGYGDAINNEICWKPVADYIDQQFEQYFRDESGLNRRNLQDTRV 409

  Fly   145 HCCFYFISPFGHGLKPLDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIESHGIKIY 209
            |||.||:||.|||::|:|:||::.|..||||||::.|||.||..|:.:.|.||..||:.:||:||
 Frog   410 HCCLYFLSPLGHGMRPMDIEFLQALQDKVNIVPILGKADSLTPTELQQKKQRIRDEIDKYGIRIY 474

  Fly   210 PLPDCDSDEDEDYKEQVKQLKEAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPDHCDFIKL 274
            ..|:||.|||||:|:|..:||:::||||.|:||::||.|::||||:||||||||||.:|||||||
 Frog   475 QFPECDPDEDEDFKQQDIELKKSIPFAVIGSNTIIEVNGRRVRGRMYPWGVVEVENEEHCDFIKL 539

  Fly   275 RTMLI-THMQDLQEVTQEVHYENYRS---DRLAKGIKGKENGVKAERDSSSQVVSNSVLGEKD-- 333
            ||||| ||||||::||:|.||||||:   ..|.:.:..:.|..|..|:|.:.....|:....|  
 Frog   540 RTMLIRTHMQDLKDVTRETHYENYRAQCIQNLTQRVVRERNRNKLTRESGTDFPIPSMPPSPDHE 604

  Fly   334 --RILQEKEAELRRMQEMLAQMQARMQAQQ 361
              |:::||:.|||||.|:|.:||.:|:..|
 Frog   605 TQRLIREKDEELRRMHEVLQKMQRQMKDSQ 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Septin1NP_523430.1 Septin 33..304 CDD:395596 171/274 (62%)
septin4XP_002933653.2 PTZ00121 <56..206 CDD:173412
Septin 298..570 CDD:395596 170/271 (63%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.