DRSC/TRiP Functional Genomics Resources

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Protein Alignment peng and PUF6

DIOPT Version :9

Sequence 1:NP_523429.1 Gene:peng / 33112 FlyBaseID:FBgn0015527 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_010784.1 Gene:PUF6 / 852107 SGDID:S000002904 Length:656 Species:Saccharomyces cerevisiae


Alignment Length:674 Identity:154/674 - (22%)
Similarity:300/674 - (44%) Gaps:132/674 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 DKRLGGNKFRGKPQTQPQAPAEGEKQDWNKFKKEKKDLKLKRKSAKDTYEISKEANQIHEKLRCR 150
            :::.|.:|..|           ||..:..:.:|..|:.|::|||.....:|    ..:.|:||.:
Yeast    88 EEKEGKDKSEG-----------GENGNHTEQRKLLKERKMQRKSGTQVQQI----KSVWERLRVK 137

  Fly   151 R----TENKDKLVEQIYKVLNVGDTISKVVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEM 211
            .    .:.::||..:|:::..  |.||.:|..||.:|::|:::||:|...|.:|.:.|......:
Yeast   138 TPPLPKQIREKLSNEIWELSK--DCISDLVLKHDASRIVQTLVKYSSKDRREQIVDALKGKFYVL 200

  Fly   212 CQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSGLLDSMY-QSATPNQRIYMRQE 275
            ..|.|.::.:.::|.||:.:::..:::.|:|.:.:|..|..|:.:::.:: ..||..||..|.:|
Yeast   201 ATSAYGKYLLVKLLHYGSRSSRQTIINELHGSLRKLMRHREGAYVVEDLFVLYATHEQRQQMIKE 265

  Fly   276 FYGDLY----RKAKDSNVKTLSDTYKEATNMKA-SILGSVKANLDHVANKQLVDSALVHAVMLEY 335
            |:|..|    ...||..::.:.::..|..|:.| :::|::.|:::    |......::||.|.||
Yeast   266 FWGSEYAVFRETHKDLTIEKVCESSIEKRNIIARNLIGTITASVE----KGSTGFQILHAAMREY 326

  Fly   336 LRACDEDE--EKLEETVTAFAALVPHMLSTKEGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIAN 398
            ::..:|.|  |.:|.....||.||    .|.|||:.|.....::..|.|:.|:|.:|.|..|:..
Yeast   327 VKIANEKEISEMIELLHEQFAELV----HTPEGSDVACTLVARANAKERKLILKALKNHAEKLIK 387

  Fly   399 HEHGHVFLISLLNALDDTKATKKAIYDHLHGDLKALMSSPYGRRVIQWLVAPGDTTCFHP----E 459
            :|:|::..|::||.:|||....|.....:...|:..:...:|||...:::...|...|.|    |
Yeast   388 NEYGNIVFITILNCVDDTVLVFKTFSPTVKEHLQEFIIDKFGRRPWLYILLGLDGKYFSPIVKNE 452

  Fly   460 FIRTVEEGLAFGKKEKELRRKEILEQIEAPIAQSIAEDAAFWLSNSHIGLVTGDILNHIQGESYE 524
            .:|.:|...|..||:...||.|:|.:.......:|::|        :..::|.::          
Yeast   453 LLRYIELSKATSKKDPLQRRHELLSKFAPMFLSTISKD--------YSSILTENL---------- 499

  Fly   525 KAASALAQVVVQPEWRISADAAGPQPQDKKKPHNDVEAIIAQATKQRRKLLYVESSSDDEDEDED 589
             ....:|:|::..|                                    ||.:.:..|:::.:.
Yeast   500 -GCQFIAEVLINDE------------------------------------LYAQLNEKDQEKYQQ 527

  Fly   590 --EDEESDDEGDEKEQKEAAADDAEPKVKKAKKEPKKPKAKEEEPAAPL--VSGIEEAGMHIVLK 650
              .:..:..:||..|::.........::.||..:..|...||:: ..||  |.|:          
Yeast   528 VLNNILTTFKGDITEEEHPIHRAFSTRLLKALIQGGKWNNKEKK-VIPLKNVQGL---------- 581

  Fly   651 KILKNDGKREGTPFSQQLLQNL--SSDVLKAWLGVNRACFVLLKLVEECPALLDDCKKAIAAERS 713
                      |.||:::|...:  ||::|: |:....:.|.::.|.|    .|.|.|:.....:.
Yeast   582 ----------GVPFAEKLYDEIIDSSNLLE-WINNADSSFTIVALYE----TLKDQKEGKPFLKD 631

  Fly   714 L----SQILADRKTPGAKLLAAKL 733
            |    |:|..|....|::|||..|
Yeast   632 LRGVQSKITTDESNKGSQLLAKLL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pengNP_523429.1 Pumilio <183..>254 CDD:277559 17/70 (24%)
CPL 438..>537 CDD:285370 21/102 (21%)
PUF6NP_010784.1 Pumilio 173..431 CDD:421854 70/265 (26%)
CPL 425..567 CDD:400452 31/196 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343821
Domainoid 1 1.000 131 1.000 Domainoid score I1124
eggNOG 1 0.900 - - E1_KOG2050
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I1130
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55991
OrthoFinder 1 1.000 - - FOG0004242
OrthoInspector 1 1.000 - - oto99715
orthoMCL 1 0.900 - - OOG6_102938
Panther 1 1.100 - - LDO PTHR13389
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1033
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.790

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