DRSC/TRiP Functional Genomics Resources

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Protein Alignment peng and PUM24

DIOPT Version :10

Sequence 1:NP_523429.1 Gene:peng / 33112 FlyBaseID:FBgn0015527 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_566559.1 Gene:PUM24 / 820934 AraportID:AT3G16810 Length:641 Species:Arabidopsis thaliana


Alignment Length:602 Identity:148/602 - (24%)
Similarity:262/602 - (43%) Gaps:117/602 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VKPGAGGAKKFDKSGPGGFKKFDKSGATGDKRLGGN-------KFRGKPQTQPQAPAEGEKQDWN 114
            :||.....:|...|.    .|||...:...|.:.|.       || |||::     |..::|..|
plant     6 LKPQKSTKRKDTDSS----AKFDSLKSKKPKLVSGEQQQHVKPKF-GKPKS-----AGDKEQSTN 60

  Fly   115 KFKKEK----KDL-KLKRKSAKDTYEISKEANQIHEKLRCRR--TENKDKLVEQIYKVLNVGDTI 172
            ..|||:    |:| :.::|..|..|.:.:|...:.||:|.|.  .|::.||:.:..:.:.  ..:
plant    61 LSKKERRVQAKELTEARKKKRKPHYNLEQELVSLWEKMRRRNIGKEDRSKLISEAIRKMK--GKV 123

  Fly   173 SKVVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLV 237
            .::..:|.::||:|:.:|:.|.|.:..:..:|.|..:.:..:|||...:|:||...:....|..:
plant   124 PEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACI 188

  Fly   238 DSLYGHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYG---DLYRKAKDSNVKTLSDTYKEA 299
            .||.||:..|..|..||.:::..|...:..|:..:..|.|.   .|::....||.||:.|...:.
plant   189 SSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQELLAELYSTELQLFKGLTTSNEKTVVDIIAKL 253

  Fly   300 TNMKASILGSVKANLDHVANKQLVDSALVHAVMLEYLRACDE-DEEKLEETVTAFAALVPHMLST 363
            ...|.::...:.|.:..:..|.:||..:.|.:::|||...|: ....:.:.:|  .:|:..|:.|
plant   254 GLQKGAVNRHMTAIIQPILEKGIVDHTITHKLLIEYLTIADKTSAADVLQLLT--GSLLLRMVHT 316

  Fly   364 KEGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIANHEHGHVFLISLLNALDDTKATKKAIYDHLH 428
            ::||..|::.....:.|.|:.|||.:|||:.|:|..:.|.:.|..:.:.:||||...|.|...|.
plant   317 RDGSRLAMLSIKHGSAKERKKIIKAMKEHVKKMAFDQFGSMVLACIFSIVDDTKLVTKIIVRELE 381

  Fly   429 GDLKALMSSPYGRRVIQWLVAPG------------------------------------------ 451
            ..||.|:....|||.:..|:.|.                                          
plant   382 ATLKDLVMDKNGRRPLLQLLHPNSSRYLSHDDLAALDLSVPSLCSMDKSETSSKTKDTDGNEIGE 446

  Fly   452 -------DTTCFHPEFIRTVEEGLAF--GKKEKELRRKEILEQIEAPIAQSI----AEDAAFWLS 503
                   ||...|.:.    ||.:..  |||:..:||:|:|  :.:.:|:.:    .|:|..:| 
plant   447 ETKDEQEDTVAEHSDH----EENVTAMGGKKDPLVRRQELL--VNSGLAERLIDVCVENAEEFL- 504

  Fly   504 NSHIGLVTGDILNHIQGESYEKA--------ASALAQVVVQPEWRISADAAGPQPQDKKKPHNDV 560
            .|..|       |.:.   ||.|        ..:|::.:.:....||:.||.|:||:.:|   |.
plant   505 QSKFG-------NEVM---YEVAIGGSDGILCPSLSEKLCELYEAISSVAAEPKPQESEK---DS 556

  Fly   561 EAIIAQATKQR--RKLL 575
            |.|:......|  |:|:
plant   557 EHILENFHSSRTIRRLV 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pengNP_523429.1 Pumilio <183..>254 CDD:480718 21/70 (30%)
Pumilio 438..>537 CDD:480718 28/161 (17%)
PUM24NP_566559.1 Pumilio 135..402 CDD:480718 75/268 (28%)
Pumilio 389..575 CDD:480718 42/205 (20%)

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