DRSC/TRiP Functional Genomics Resources

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Protein Alignment peng and pum3

DIOPT Version :10

Sequence 1:NP_523429.1 Gene:peng / 33112 FlyBaseID:FBgn0015527 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_001340777.1 Gene:pum3 / 553068 ZFINID:ZDB-GENE-050506-149 Length:629 Species:Danio rerio


Alignment Length:724 Identity:188/724 - (25%)
Similarity:328/724 - (45%) Gaps:126/724 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GKRAN-GQKFKPGG-AGGARKFDKFGGGAGKSFVKPGA-GGAKKFDKSGPGGFKKFDKSGATGDK 87
            ||:.: ..|.|||| ..|.|.|.......||.|.|.|. ||.:||::....|  ||.|      |
Zfish    15 GKKPSFKSKGKPGGKPQGKRPFKPHNNDKGKGFRKSGGEGGPQKFNRKPTDG--KFAK------K 71

  Fly    88 RLGGNKFRGKPQTQPQAPAEGEKQDWNKFKKEKKDLKLKRKSA--KDTYEISKEANQIHEKLR-- 148
            |    ||.|....|.:.. |.:|..|::||::||:|||.|:..  |::|:|...|.|:.|.:|  
Zfish    72 R----KFPGDRIKQEEGD-ERKKPKWDEFKQKKKELKLNRQQTDRKESYQIVSRAKQVWEMVRRK 131

  Fly   149 -CRRTENKDKLVEQIYKVLNVGDTISKVVKAHDTARVIQSMLKYASPALRAEISEKLLPFTVEMC 212
             |.: :.:.||::::..:  |...|..:..|||:.||:|..:::.|...|.|:.::|....||:.
Zfish   132 DCDK-QKRTKLMKELQDL--VKGKIKTIAFAHDSTRVLQCFIQFGSDKQRKEVFDELKEHIVELS 193

  Fly   213 QSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSGLLDSMY-QSATPNQRIYMRQEF 276
            :||||:..|::.|.||:.....:::.:..|.:.::..||..|.:::..| ..|..:||:.:.:|.
Zfish   194 KSKYARNIVKKFLMYGSKEQVGEVMLAFKGKVRQMLRHSEASSVVEYAYNDKAILSQRLMLTEEL 258

  Fly   277 YGDLYRKAKDSNVKTLSDTYKEATNMKASILGSVKANLDHVANKQ-LVDSALVHAVMLEYLRACD 340
            ||:.:...|.|...||....:.......|||..:|..|..:|.|: ::..:|||.|.|::.....
Zfish   259 YGNTFTVLKSSVCPTLEKVLEANPGKLESILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFEHAP 323

  Fly   341 EDEEKLEETVTAFAALVPHMLSTKEGSEAAVICFYKSTPKNRRAIIKNIKEHLLKIANHEHGHVF 405
            :.:.  .|.:.:....|.:|..|.:|:...:.|.:..|.|:|:.|:|.:|.::.|.|..|:.|:.
Zfish   324 DKQR--TEMIESIREAVVYMAHTHDGARVTMHCLWHGTTKDRKVIVKTMKSYIAKFAMGEYAHLV 386

  Fly   406 LISLLNALDDTKATKKAIYDHLHGDLKALMSSPYGRRVIQWLVAPGDTTCFHPEFIRTVE--EGL 468
            |::..:.:||||..|:.|...:...|..::|:.:|::|:.:|::|.|.....||.|:.:|  :|.
Zfish   387 LLAAFDCIDDTKLVKQIIISEMVSSLSEIISNKHGKKVLLYLLSPRDPAHLLPEIIQVLEKGDGN 451

  Fly   469 AFGKKEKELRRKEILEQIEAPIAQSIAEDAAFWLSNSHIGLVTGDILNHIQGESYEKAASALAQV 533
            |..||:..:||||:||.....:...:.|:|...:.:....:|..|||           .||:   
Zfish   452 AHSKKDVLIRRKELLEAASPSLLNHLCENAQSMVMDKSCCVVVSDIL-----------GSAV--- 502

  Fly   534 VVQPEWRISADAAGPQPQDKKKPHNDVEAIIAQATKQRRKLLYVESSSDDEDEDEDEDEESDDEG 598
                                                                            |
Zfish   503 ----------------------------------------------------------------G 503

  Fly   599 DEKEQKEAAADDAEPKVKKAKKEPKKPKAKEEEPAAPLVSGIEEAGMHIVLKKILKNDGKREGTP 663
            |.:...||.|..|:..:....|:.:...|  |.||.           |:|||.:::.|.|.:.|.
Zfish   504 DLRPAMEAVAALADGPLIPGGKDGQLHMA--EHPAG-----------HLVLKWLIEQDTKMKDTE 555

  Fly   664 ----FSQQLLQNLSSDVLKAWLGVNRACFVLLKLVEECPALLDDCKKAIAAERSLSQILADRKTP 724
                ||:.||:.:..:.||.|..|||...:|..|::.....:.:..||: .:.|:.::...:.:.
Zfish   556 REERFSRILLEKVGLENLKTWASVNRGAIILCCLLQSADESVAEEVKAM-LKSSIPELQRLQNSK 619

  Fly   725 GAKLLAAKL 733
            |.::|..||
Zfish   620 GIEVLLEKL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pengNP_523429.1 Pumilio <183..>254 CDD:480718 20/70 (29%)
Pumilio 438..>537 CDD:480718 27/100 (27%)
pum3NP_001340777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..92 31/89 (35%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q15397 88..100 4/11 (36%)
Pumilio 1. /evidence=ECO:0000250|UniProtKB:Q15397 160..195 11/34 (32%)
Pumilio 165..425 CDD:480718 69/261 (26%)
Pumilio 2. /evidence=ECO:0000250|UniProtKB:Q15397 196..231 8/34 (24%)
Pumilio 3. /evidence=ECO:0000250|UniProtKB:Q15397 232..260 7/27 (26%)
Pumilio 4. /evidence=ECO:0000250|UniProtKB:Q15397 272..308 9/35 (26%)
Pumilio 5. /evidence=ECO:0000250|UniProtKB:Q15397 309..344 8/36 (22%)
Pumilio 6. /evidence=ECO:0000250|UniProtKB:Q15397 345..380 10/34 (29%)
Pumilio 7. /evidence=ECO:0000250|UniProtKB:Q15397 381..418 10/36 (28%)
CPL 418..553 CDD:462370 44/225 (20%)
Pumilio 8. /evidence=ECO:0000250|UniProtKB:Q15397 419..487 21/67 (31%)
Pumilio 9. /evidence=ECO:0000250|UniProtKB:Q15397 488..534 14/125 (11%)
Pumilio 10. /evidence=ECO:0000250|UniProtKB:Q15397 535..579 16/54 (30%)
Pumilio 11. /evidence=ECO:0000250|UniProtKB:Q15397 580..618 7/38 (18%)

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