DRSC/TRiP Functional Genomics Resources

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Protein Alignment peng and Pum3

DIOPT Version :9

Sequence 1:NP_523429.1 Gene:peng / 33112 FlyBaseID:FBgn0015527 Length:737 Species:Drosophila melanogaster
Sequence 2:NP_803425.1 Gene:Pum3 / 52874 MGIID:106253 Length:648 Species:Mus musculus


Alignment Length:744 Identity:184/744 - (24%)
Similarity:325/744 - (43%) Gaps:158/744 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KGPANVANTASPLKAHESSGKRANGQKFKPGGAGGARKFDKFGGGAGKSFVKPGAGGAKKFDKSG 71
            |...:.::...|.||.:..|.:...:.|:.|.                  .|||..|.|:| |:.
Mouse    26 KNSESSSSKTFPRKAVKEGGPKVTSKNFEKGA------------------TKPGKKGVKQF-KNK 71

  Fly    72 PGGFK----KFDKSGATGDKRLGGNKFRGKPQTQPQAPAE---GEKQDWNKFKKEKKDLKLKRK- 128
            |.|.|    ||.|:          |||..|.:.||...::   .:|..|:.|||:||:||..|: 
Mouse    72 PQGGKGPKDKFQKA----------NKFSKKRKFQPDGESDESGAKKPKWDDFKKKKKELKQSRQL 126

  Fly   129 SAKDTYEISKEANQIHEKLR---CRRTENKDKLVEQIYKVLNVGDTISKVVKAHDTARVIQSMLK 190
            |.|..|:|...|..|.|.||   |.: |.:.||:..:.|::.  ..|..:..|||:.||||..::
Mouse   127 SDKTNYDIVVRAKHIWESLRRKDCDK-EKRVKLMSDLQKLIQ--GKIKTIAFAHDSTRVIQCFIQ 188

  Fly   191 YASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLYGHIVRLAGHSIGSG 255
            |.:...|.:..::|....||:.::||::..|::.|.||:....|:::.|..||:.::..||..|.
Mouse   189 YGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMYGSKPQVAEIIRSFKGHVRKMLRHSEASA 253

  Fly   256 LLDSMY-QSATPNQRIYMRQEFYGDLYRKAKDSNVKTLSDTYKEATNMKASILGSVKANLDHVAN 319
            :::..| ..|...||..:.:|.||:.::..|.::..||....:........|:..:|..|..:|.
Mouse   254 IVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLDKVLELQPAKLELIMDEMKQILTPMAQ 318

  Fly   320 KQ-LVDSALVHAVMLEYLRACDEDEEKLEETVTAFAALVPHMLSTKEGSEAAVICFYKSTPKNRR 383
            |: ::..:|||.|.|::....  ..:...|.:.|....|.::..|.:|:..|:.|.:..|||:|:
Mouse   319 KEAVIKHSLVHKVFLDFFTYA--PPKPRSELIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRK 381

  Fly   384 AIIKNIKEHLLKIANHEHGHVFLISLLNALDDTKATKKAIYDHLHGDLKALMSSPYGRRVIQWLV 448
            .|:|.:|.::.|:||.::.|:.|::..:.:||||..|:.|...:...|.::::..|||:|:.:|:
Mouse   382 VIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLM 446

  Fly   449 APGDTTCFHPEFIRTVE--EGLAFGKKEKELRRKEILEQIEAPIAQSIAEDAAFWLSNSHIGLVT 511
            :|.|.....||.|..::  :|.|..||:..:||:|:||.|...                      
Mouse   447 SPRDPAHTVPELIELLQKGDGNAHSKKDTAIRRRELLESISPA---------------------- 489

  Fly   512 GDILNHIQGESYEKAASALAQVVVQPEWRISADAAGPQPQDKKKPHNDVEAIIAQATKQRRKLLY 576
              :|:::||.:.|......|.|:|..                         ::..||        
Mouse   490 --LLSYLQGHTQEVVLDKSACVLVSD-------------------------MLGSAT-------- 519

  Fly   577 VESSSDDEDEDEDEDEESDDEGDEKEQKEAAADDAEPKVKKAKKEPKKPKAKEEEPAAPLVSGIE 641
                                 ||.:...:|.|..|..::....|:.:...|  |.||.       
Mouse   520 ---------------------GDVQPAMDAIASLAAAELHPGGKDGELHVA--EHPAG------- 554

  Fly   642 EAGMHIVLKKILKNDGK-----REGTPFSQQLLQNLSSDVLKAWLGVNRACFVLLKLVEEC---- 697
                |:|||.:|:.|.|     :||. |::.|::.:....||:|..:||...:|..|::.|    
Mouse   555 ----HLVLKWLLEQDKKMKESGKEGC-FAKTLVERVGMKNLKSWASINRGAIILSSLLQSCDQEV 614

  Fly   698 --------PALLDDCKKAIAAERSLSQIL 718
                    ..|:...:|..::.|.:..:|
Mouse   615 VNKVKGGLKPLIPTLEKNKSSSRGIQTLL 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pengNP_523429.1 Pumilio <183..>254 CDD:277559 21/70 (30%)
CPL 438..>537 CDD:285370 27/100 (27%)
Pum3NP_803425.1 Pumilio 182..387 CDD:356422 54/206 (26%)
CPL 434..571 CDD:369709 46/227 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837144
Domainoid 1 1.000 171 1.000 Domainoid score I3742
eggNOG 1 0.900 - - E1_KOG2050
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 211 1.000 Inparanoid score I3652
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55991
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004242
OrthoInspector 1 1.000 - - oto93784
orthoMCL 1 0.900 - - OOG6_102938
Panther 1 1.100 - - LDO PTHR13389
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1033
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.790

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