DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and scinlb

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_998255.2 Gene:scinlb / 406363 ZFINID:ZDB-GENE-040426-2068 Length:720 Species:Danio rerio


Alignment Length:772 Identity:221/772 - (28%)
Similarity:342/772 - (44%) Gaps:91/772 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 GQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGNEATLDKRAC 558
            |::.||.:|.|||.....:.:.:||.|:.||.||:|.|    .....:.|..|:|||.:.|:...
Zfish    11 GKVSGLQVWRIENMDLKPVPKNLHGSFFTGDAYILLHT----TSAPSYSIHMWLGNECSQDESGA 71

  Fly   559 AAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGGRTATGFYTIE-EMIHITRLYL 622
            |||.:..|.:|||......||.|.:||..||..|::.:.|::|| .|:||:.:. ..:::.|  |
Zfish    72 AAIFSTQLDDFLGGSPVQFREVQNNESLTFLGYFKSGIKYMQGG
-VASGFHHVSTNDVNVKR--L 133

  Fly   623 VHAYG-ATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTERKN 686
            :|..| ..|....||.:..|.:....|::|||..||.|.|.........||..:|..|...||..
Zfish   134 LHIKGRRVIRATEVAMSWASFNKGDCFIVDLGKDIYQWCGSGCNRFERLKASKLAIDIRDNERNG 198

  Fly   687 KCEIQLERQGEESAEFWQGLGMTSEEADAAEPPKEHVPEDYQPVQPRLYQVQLGMGYLELPQVEL 751
            :.::.:..:..|.....|.||..||.|.|. |..|.| |.....:.:||.:....|.::..:|..
Zfish   199 RAKLVMVEEDAEPDALIQALG
PKSEIAPAT-PDDEQV-EISNKNKGKLYMISDASGSMKTTEVAE 261

  Fly   752 PEQKLCHTLLNSKHVYILDCYTD--LFVWFGKKSTRLVRAAAVKLSRELFNMMDRPDYALVMRVP 814
            ........|:|:: .||||...|  :|||.|.|:|...|.||:..:.:.....:.....::..:|
Zfish   262 KSPFKQEMLINTE-CYILDNGVDNNVFVWKGSKATTSERKAAMSAAEQFIKEKNYSKKTMIQVLP 325

  Fly   815 EGNEMQIFRTKFAGWDEVMAVDFTRTAKSVAKTGANLTQWARQQETRTDLAALFMPRQSAMPLAE 879
            ||.|..:|:..|:.|.:.........|.::.|.       |..::...|.::|    .....:|.
Zfish   326 EGGETTLFKQFFSDWKDKYQTTGPTKAYTIGKI-------ANVEQIPFDASSL----HDNKTMAA 379

  Fly   880 AEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYVFLCRYCIPIEEPENGSEDGANP 944
            ...:.::.:..:|:..   :|....|.:..:..|:|:.|:||:.|..|                 
Zfish   380 QHNMVDDGSGKVEIWR---VEEGARVPVDPKTYGQFFGGDCYLILYTY----------------- 424

  Fly   945 AADVSKSSANNQPEDEIQCVVYFWQGRNAGNMGWLTFTFTLQKKFKAMFGEELEVVRIFQQQENL 1009
                       :.|.:.|.::|.|||............|...:...:|.|..:: ||:.|..|..
Zfish   425 -----------KKETKDQYIIYTWQGLKCTQDELAASAFLTVQLDDSMGGAPVQ-VRVTQGHEPP 477

  Fly  1010 KFMSHFKRK-FIIHTGKRKDKAHTAKGKSPVEFFHLRSNGGALTTRLIQINPDAVHLNSTFCYIL 1073
            ..||.||.| .|||.|....|....| .:....||:|.: .:..||.:::.|.|..||:...::|
Zfish   478 HLMSLFKGKPMIIHAGGTSRKDGQTK-PAATRLFHIRQS-TSKATRAVEVEPSAASLNTNDVFVL 540

  Fly  1074 HVPFETEDDSQSGIVYVWIGSKACNEE---AK-LVQDIAEQMFNSPWVSLQILNEGDEPENFFWV 1134
                     ..||.|:||.|:.|.:||   || :|..:..|..:.|        ||.|||: ||.
Zfish   541 ---------KTSGGVFVWKGAGASDEEMAAAKYVVSVLGGQSTDVP--------EGKEPES-FWA 587

  Fly  1135 ALGGRKPYDTD---AEYMNYTRLFRCSNERGYYTVAEKCADFCQDDLADDDIMILDNGEHVFLWM 1196
            ||||:|.|...   ...:...|||.|||:.|...|.|...||.|.|||.||:|:||..:.:|||:
Zfish   588 ALGGKKDYQKSPALQRTIKPARLFGCSNKTGRLVVEEVPGDFTQSDLATDDVMLLDTWDQIFLWI 652

  Fly  1197 GPRCSEVEVKLAYKSAQVYIQHMRIKQPERPRKLFLT--MKNKESRRFTKCFHGWSA 1251
            |...:|||...:.|.|:.|::    ..|.....|.:|  .:..|...||..||.|:|
Zfish   653 GNEANEVEKTGSPKIAKDYVE----SDPAGRCGLAITTIKQGSEPPTFTGWFHAWNA 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 38/107 (36%)
gelsolin_like 618..706 CDD:200436 24/88 (27%)
gelsolin_S3_like 729..828 CDD:200448 26/100 (26%)
gelsolin_like 920..1015 CDD:200436 19/94 (20%)
gelsolin_S5_like 1037..1141 CDD:200444 35/107 (33%)
gelsolin_S6_like 1151..1250 CDD:200447 38/100 (38%)
scinlbNP_998255.2 gelsolin_S1_like 7..115 CDD:200446 38/107 (36%)
gelsolin_S2_like 130..219 CDD:200445 24/90 (27%)
gelsolin_S3_like 239..339 CDD:200448 26/100 (26%)
gelsolin_S4_like 383..483 CDD:200449 25/131 (19%)
gelsolin_S5_like 505..594 CDD:200444 35/107 (33%)
gelsolin_S6_like 607..704 CDD:200447 38/100 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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