DRSC/TRiP Functional Genomics Resources

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Protein Alignment fliI and Lap1

DIOPT Version :10

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_611007.1 Gene:Lap1 / 36670 FlyBaseID:FBgn0033984 Length:849 Species:Drosophila melanogaster


Alignment Length:498 Identity:145/498 - (29%)
Similarity:215/498 - (43%) Gaps:80/498 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVRGVDFTKNDFSAT----FPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLNHNRLEK 66
            |.|.....|.|:|.|    ||...:....::.|.|..|:|..:|.:|.:.|.|..|.:|.|.||.
  Fly    13 FKREEVIDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLES 77

  Fly    67 IFGELTELSCLRSLDLRHNQLKNSGIPPELFHLEELTTLDLSHNKLKEVPEGLERAKNLIVLNLS 131
            |...:..|..|:.|||..|.:.|  :|.|:...:.||.||||.|.|:.:|:.:....:|..|.|:
  Fly    78 IPQAIGSLRQLQHLDLNRNLIVN--VPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLN 140

  Fly   132 NNQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLINLKTLDLSHNPL--------ELFQLR 188
            ...:|.:|.. |..|.:|..|:|..|.|.|||....|||||:.||:..|..        ||..||
  Fly   141 ETYLEFLPAN-FGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLR 204

  Fly   189 QL--------------PSLQSLEVLKMSGTQRTLLNFPTSIDSLANLCELDLSHNSLPKLPDCVY 239
            :|              ..|:.|:..:.:|  ..|...|:.:.:..|:..|.:..|||...|..|.
  Fly   205 ELWIDFNQIRRVSANIGKLRDLQHFEANG--NLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVG 267

  Fly   240 NVVTLVRLNLSDNELTELTAGVELWQRLESLNLSRNQLVALPAALCKLPKLRRLLVNDNKLNFEG 304
            .:.:||......|.||||...:...::||.|.||.|:|:.||:.:..|..||.|..:||:|  ..
  Fly   268 MLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL--RQ 330

  Fly   305 IPSGIGKLGALEVFSAANNLLEMVPEGLCRCGALKQLNLSCNRLITLPDAIHLLEGLDQLDLRNN 369
            :|..:.....|.|.|.|||.|..:|:.:.....:|.||:..|.:..||.::..|..|..:.|.:|
  Fly   331 LPDELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWLSDN 395

  Fly   370 -PELVMPPKPSEASKATSL----------------------EFYNIDFSLQTQ------------ 399
             .:.::|.:..:||..|.|                      |.|...::.|.|            
  Fly   396 QSQPLVPLQYLDASTKTQLTCFMLPQVTFKMNSIQAQQQAQEQYEFVYANQQQPHASPSRRICFA 460

  Fly   400 -----LRLAGAAVPPSMPS------SATPKDSTARKIRLRRGP 431
                 |..|.|...|:.||      :.|| |..|..:||.|.|
  Fly   461 EEATILSNAKAQPAPNYPSFVAAPPTPTP-DQMAGSVRLMRSP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380 7/26 (27%)
leucine-rich repeat 31..53 CDD:275380 6/21 (29%)
LRR 33..405 CDD:443914 125/433 (29%)
leucine-rich repeat 54..76 CDD:275380 8/21 (38%)
leucine-rich repeat 77..101 CDD:275380 8/23 (35%)
leucine-rich repeat 102..124 CDD:275380 9/21 (43%)
leucine-rich repeat 125..148 CDD:275380 7/22 (32%)
leucine-rich repeat 149..171 CDD:275380 10/21 (48%)
leucine-rich repeat 172..195 CDD:275380 10/44 (23%)
leucine-rich repeat 196..220 CDD:275380 4/23 (17%)
leucine-rich repeat 221..243 CDD:275380 6/21 (29%)
leucine-rich repeat 244..266 CDD:275380 7/21 (33%)
leucine-rich repeat 267..289 CDD:275380 10/21 (48%)
leucine-rich repeat 290..314 CDD:275380 7/23 (30%)
leucine-rich repeat 315..335 CDD:275380 8/19 (42%)
leucine-rich repeat 338..360 CDD:275378 7/21 (33%)
gelsolin_S1_like 491..602 CDD:200446
gelsolin_like 618..706 CDD:200436
gelsolin_S3_like 729..828 CDD:200448
gelsolin_like 920..1015 CDD:200436
gelsolin_S5_like 1037..1141 CDD:200444
gelsolin_S6_like 1151..1250 CDD:200447
Lap1NP_611007.1 LRR 12..407 CDD:443914 123/400 (31%)
leucine-rich repeat 21..41 CDD:275380 6/19 (32%)
leucine-rich repeat 42..64 CDD:275380 6/21 (29%)
leucine-rich repeat 65..87 CDD:275380 8/21 (38%)
leucine-rich repeat 88..110 CDD:275380 8/23 (35%)
leucine-rich repeat 111..133 CDD:275380 9/21 (43%)
leucine-rich repeat 134..156 CDD:275380 7/22 (32%)
leucine-rich repeat 157..179 CDD:275380 10/21 (48%)
leucine-rich repeat 180..202 CDD:275380 6/21 (29%)
leucine-rich repeat 203..225 CDD:275380 4/21 (19%)
leucine-rich repeat 226..248 CDD:275380 4/23 (17%)
leucine-rich repeat 272..294 CDD:275380 7/21 (33%)
leucine-rich repeat 295..317 CDD:275380 10/21 (48%)
leucine-rich repeat 318..340 CDD:275380 7/23 (30%)
leucine-rich repeat 364..386 CDD:275380 7/21 (33%)
PDZ_canonical 778..846 CDD:467153
Blue background indicates that the domain is not in the aligned region.

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