DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and capgb

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001001594.2 Gene:capgb / 336597 ZFINID:ZDB-GENE-030131-8541 Length:345 Species:Danio rerio


Alignment Length:347 Identity:100/347 - (28%)
Similarity:156/347 - (44%) Gaps:22/347 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 DDGQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGNEATLDKR 556
            |:.:.|||..|.:|......:.:...|.|:.||.|:||    |:.|....::..|||.:::.|::
Zfish    13 DEVRQPGLYCWRVEKMKAVPLNQAEVGAFFNGDSYLVL----DNRGDQGADLHMWIGEKSSRDEQ 73

  Fly   557 ACAAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGGRTATGFYTIEE-MIHITRL 620
            ...|:.|..|.||||......|:.||.||.:|:.||...|.|.||| ..:||...:. ...:.||
Zfish    74 VACAMLATQLDNFLGGDPVQHRQVQGYESPEFMKLFPRGVSYKEGG
-VESGFRRAQSGPGPVQRL 137

  Fly   621 YLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTERK 685
            |.:.. ...|..:.|..:..|.:....|:||||..|..|:|.::......|.|.:|..|..|:|.
Zfish   138 YQIKG-KRNIRAKEVDLSWQSFNKGDCFILDLGETIVSWIGSQANIFEKQKVREIASLIRDTDRH 201

  Fly   686 NKCEIQLERQGEESAEFWQGLGMTSEEADAAEPPKEHVPEDYQPV----QPRLYQVQLGMGYLEL 746
            .|.:|....:|||:.|..:.||...|       .||..||:....    ...||:|....|.::|
Zfish   202 GKAQITNVNEGEETQEMLKVLG
PVPE-------LKESTPEEDSKADASNSASLYKVSDATGSMKL 259

  Fly   747 PQVELPEQKLCHTLLNSKHVYILD--CYTDLFVWFGKKSTRLVRAAAVKLSRELFNMMDRPDYAL 809
            .:|. .:......||.....:|||  ....:|||.|..:....:..|:|::.:....|:.|....
Zfish   260 TKVS-EKSPFAKDLLVRDDCFILDNGANGKIFVWKGSGANAEEKRVALKMADDFIQQMNYPKMKT 323

  Fly   810 VMRV-PEGNEMQIFRTKFAGWD 830
            .:.: |:|.|..||:..|..|:
Zfish   324 QVEILPQGRETVIFKQFFQSWN 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 37/109 (34%)
gelsolin_like 618..706 CDD:200436 26/87 (30%)
gelsolin_S3_like 729..828 CDD:200448 25/105 (24%)
gelsolin_like 920..1015 CDD:200436
gelsolin_S5_like 1037..1141 CDD:200444
gelsolin_S6_like 1151..1250 CDD:200447
capgbNP_001001594.2 gelsolin_S1_like 11..119 CDD:200446 37/109 (34%)
gelsolin_S2_like 134..223 CDD:200445 26/89 (29%)
gelsolin_S3_like 245..343 CDD:200448 25/98 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.