DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and gsna

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_021324427.1 Gene:gsna / 321099 ZFINID:ZDB-GENE-030131-9653 Length:738 Species:Danio rerio


Alignment Length:801 Identity:222/801 - (27%)
Similarity:350/801 - (43%) Gaps:120/801 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 YSKFFEKDDGQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGN 549
            |...||: .|:.|||.:|.||.|....:.|.::|.||.||.|:||||.....|.|.:::.||:|:
Zfish     3 YHPEFER-AGKEPGLQVWRIEKFDLVAVPENLYGGFYTGDAYLVLKTTKQTSGNLQYDLHFWLGD 66

  Fly   550 EATLDKRACAAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGGRTATGF-YTIEE 613
            ..|.|:...|||..|.:.::||.:....||.||.||:.||..|:..:.|::|| .|:|| :.:..
Zfish    67 YCTQDESGSAAIFTVQMDDYLGGKPIQYREVQGHESKAFLGYFKKGLQYMQGG-VASGFKHVVTN 130

  Fly   614 MIHITRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEK 678
            .:.:.|:..|.. ...:....|..:..|.:....|:||||..||.|.|.:|......||..:|:.
Zfish   131 EVVMQRVLQVKG-RRVVRATEVPVSWDSFNQGDCFILDLGNEIYQWCGSKSNRFEKLKATQLAKG 194

  Fly   679 ISKTERKNKCEIQLERQGEESAEFWQGLGMTSEEADAAEPPKEHVPED-YQPVQPRLYQVQLGMG 742
            |...||..:..:.:..:|.|..:..:.||   |:.|..|...:.|..| ......:||:|....|
Zfish   195 IRDNERSGRARVYVCDEGVEREKMLEVLG---EKPDLPEGASDDVKADASNRKMAKLYKVSDASG 256

  Fly   743 YLELPQVELPEQKLCHTLLNSKHVYILDCYTD--LFVWFGKKSTRLVRAAAVKLSRELFNMMDRP 805
            .:.:..| ..|.....:.|.|...:|||..:|  :|||.||.:....|.||:|.:.|....|..|
Zfish   257 DMAIALV-AAENPFTQSALESSDCFILDHGSDGKIFVWKGKDANMEERKAAMKAADEFIKKMGYP 320

  Fly   806 DYALVMRVPEGNEMQIFRTKFAGW---DEVMAVDFTRTAKSVAKTGANLTQWARQQETRTDLAAL 867
            .:..|..:||..|..:|:..|..|   |:...:.....:.|:||.          ::...|.:.|
Zfish   321 KHTQVQILPEMGETPLFKQFFKNWRDVDQTEGMGVAYVSNSIAKI----------EKVPFDASTL 375

  Fly   868 FMPRQSAMPLAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYVFLCRYCIPIE 932
                ..:..:|....:.:..|.:.::..   :|....|.:.....|:||.|:.|:.|..|     
Zfish   376 ----HDSPAMAAQHGMIDSGNGEKQIWR---IEGSDKVPVDPSTYGQFYGGDSYIILYSY----- 428

  Fly   933 EPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNA--GNMGWLTFTFTLQKKFKAMFGE 995
              .:|...|.                     ::|.|||.::  ..:|           ..|:.|.
Zfish   429 --RHGGRQGH---------------------IIYIWQGADSTQDEIG-----------ASAILGA 459

  Fly   996 ELE-----------------VVRIFQQQENLKFMSHF-KRKFIIHT-GKRKDKAHTAKGKSPVEF 1041
            :|:                 .||:.|.:|....||.| .:..::|. |..::...||..::  ..
Zfish   460 QLDDELGGGPVQMAGAPLTTQVRVVQGKEPAHLMSLFGGQPMVVHKGGTSREGGQTAPAET--RL 522

  Fly  1042 FHLRSNGGALTTRLIQINPDAVHLNSTFCYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQD 1106
            |.:||| .|..||.::|:..:.:|||...::|..|..:         ::|:|..|.:.|.:    
Zfish   523 FQVRSN-SAGCTRAVEIDAVSSNLNSNDAFVLVTPAAS---------FIWVGQGASDIEKR---- 573

  Fly  1107 IAEQMFNSPWVSLQILNEGDEPENFFWVALGGRKPYDTDA---EYMNY--TRLFRCSNERGYYTV 1166
            .|:|:.....||...|:||.| :..||.||||:..|.|.:   :.||.  .|||.|||:.|.:.:
Zfish   574 GAQQLCGILGVSPSELSEGGE-DGGFWDALGGKAAYRTSSRLKDKMNAHPPRLFACSNKTGRFII 637

  Fly  1167 AEKCADFCQDDLADDDIMILDNGEHVFLWMGPRCSEVEVKLAYKSAQVYIQHMRIKQPER--PRK 1229
            .|...:..|:|||.||:||||..:.||:|:|....:.|...|..||..|||    ..|..  ||.
Zfish   638 EEVPGEMTQEDLATDDVMILDTWDQVFVWIGNEAHDEEKMEAMTSAAQYIQ----TDPANRDPRT 698

  Fly  1230 LFLTMKNK-ESRRFTKCFHGW 1249
            ..:.:|.. |...||..|.||
Zfish   699 AIVKIKQGFEPPTFTGWFLGW 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 42/110 (38%)
gelsolin_like 618..706 CDD:200436 22/87 (25%)
gelsolin_S3_like 729..828 CDD:200448 30/100 (30%)
gelsolin_like 920..1015 CDD:200436 19/113 (17%)
gelsolin_S5_like 1037..1141 CDD:200444 31/103 (30%)
gelsolin_S6_like 1151..1250 CDD:200447 39/104 (38%)
gsnaXP_021324427.1 gelsolin_S1_like 7..119 CDD:200446 44/112 (39%)
gelsolin_S2_like 135..223 CDD:200445 22/88 (25%)
gelsolin_S3_like 243..343 CDD:200448 30/100 (30%)
gelsolin_S4_like 387..496 CDD:200449 26/150 (17%)
gelsolin_S5_like 518..606 CDD:200444 31/104 (30%)
gelsolin_S6_like 622..720 CDD:200447 39/102 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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