DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and gsna

DIOPT Version :10

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_021324427.2 Gene:gsna / 321099 ZFINID:ZDB-GENE-030131-9653 Length:738 Species:Danio rerio


Alignment Length:801 Identity:222/801 - (27%)
Similarity:350/801 - (43%) Gaps:120/801 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 YSKFFEKDDGQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGN 549
            |...||: .|:.|||.:|.||.|....:.|.::|.||.||.|:||||.....|.|.:::.||:|:
Zfish     3 YHPEFER-AGKEPGLQVWRIEKFDLVAVPENLYGGFYTGDAYLVLKTIKQTSGNLQYDLHFWLGD 66

  Fly   550 EATLDKRACAAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGGRTATGF-YTIEE 613
            ..|.|:...|||..|.:.::||.:....||.||.||:.||..|:..:.|::|| .|:|| :.:..
Zfish    67 YCTQDESGSAAIFTVQMDDYLGGKPIQYREVQGHESKSFLGYFKKGLQYMQGG-VASGFKHVVTN 130

  Fly   614 MIHITRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEK 678
            .:.:.|:..|.. ...:....|..:..|.:....|:||||..||.|.|.:|......||..:|:.
Zfish   131 EVVMQRVLQVKG-RRVVRATEVPVSWDSFNQGDCFILDLGNEIYQWCGSKSNRFEKLKATQLAKG 194

  Fly   679 ISKTERKNKCEIQLERQGEESAEFWQGLGMTSEEADAAEPPKEHVPED-YQPVQPRLYQVQLGMG 742
            |...||..:..:.:..:|.|..:..:.||   |:.|..|...:.|..| ......:||:|....|
Zfish   195 IRDNERSGRARVYVCDEGVEREKMLEVLG---EKPDLPEGASDDVKADASNRKMAKLYKVSDASG 256

  Fly   743 YLELPQVELPEQKLCHTLLNSKHVYILDCYTD--LFVWFGKKSTRLVRAAAVKLSRELFNMMDRP 805
            .:.:..| ..|.....:.|.|...:|||..:|  :|||.||.:....|.||:|.:.|....|..|
Zfish   257 DMAIALV-AAENPFTQSALESSDCFILDHGSDGKIFVWKGKDANMEERKAAMKAADEFIKKMGYP 320

  Fly   806 DYALVMRVPEGNEMQIFRTKFAGW---DEVMAVDFTRTAKSVAKTGANLTQWARQQETRTDLAAL 867
            .:..|..:||..|..:|:..|..|   |:...:.....:.|:||.          ::...|.:.|
Zfish   321 KHTQVQILPEMGETPLFKQFFKNWRDVDQTEGMGVAYVSNSIAKI----------EKVPFDASTL 375

  Fly   868 FMPRQSAMPLAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYVFLCRYCIPIE 932
                ..:..:|....:.:..|.:.::..   :|....|.:.....|:||.|:.|:.|..|     
Zfish   376 ----HDSPAMAAQHGMIDSGNGEKQIWR---IEGSDKVPVDPSTYGQFYGGDSYIILYSY----- 428

  Fly   933 EPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNA--GNMGWLTFTFTLQKKFKAMFGE 995
              .:|...|.                     ::|.|||.::  ..:|           ..|:.|.
Zfish   429 --RHGGRQGH---------------------IIYIWQGADSTQDEIG-----------ASAILGA 459

  Fly   996 ELE-----------------VVRIFQQQENLKFMSHF-KRKFIIHT-GKRKDKAHTAKGKSPVEF 1041
            :|:                 .||:.|.:|....||.| .:..::|. |..::...||..::  ..
Zfish   460 QLDDELGGGPVQMAGAPLTTQVRVVQGKEPAHLMSLFGGQPMVVHKGGTSREGGQTAPAET--RL 522

  Fly  1042 FHLRSNGGALTTRLIQINPDAVHLNSTFCYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQD 1106
            |.:||| .|..||.::|:..:.:|||...::|..|..:         ::|:|..|.:.|.:    
Zfish   523 FQVRSN-SAGCTRAVEIDAVSSNLNSNDAFVLVTPAAS---------FIWVGQGASDIEKR---- 573

  Fly  1107 IAEQMFNSPWVSLQILNEGDEPENFFWVALGGRKPYDTDA---EYMNY--TRLFRCSNERGYYTV 1166
            .|:|:.....||...|:||.| :..||.||||:..|.|.:   :.||.  .|||.|||:.|.:.:
Zfish   574 GAQQLCGILGVSPSELSEGGE-DGGFWDALGGKAAYRTSSRLKDKMNAHPPRLFACSNKTGRFII 637

  Fly  1167 AEKCADFCQDDLADDDIMILDNGEHVFLWMGPRCSEVEVKLAYKSAQVYIQHMRIKQPER--PRK 1229
            .|...:..|:|||.||:||||..:.||:|:|....:.|...|..||..|||    ..|..  ||.
Zfish   638 EEVPGEMTQEDLATDDVMILDTWDQVFVWIGNEAHDEEKMEAMTSAAQYIQ----TDPANRDPRT 698

  Fly  1230 LFLTMKNK-ESRRFTKCFHGW 1249
            ..:.:|.. |...||..|.||
Zfish   699 AIVKIKQGFEPPTFTGWFLGW 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR 33..405 CDD:443914
leucine-rich repeat 54..76 CDD:275380
leucine-rich repeat 77..101 CDD:275380
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 42/110 (38%)
gelsolin_like 618..706 CDD:200436 22/87 (25%)
gelsolin_S3_like 729..828 CDD:200448 30/100 (30%)
gelsolin_like 920..1015 CDD:200436 19/113 (17%)
gelsolin_S5_like 1037..1141 CDD:200444 31/103 (30%)
gelsolin_S6_like 1151..1250 CDD:200447 39/104 (38%)
gsnaXP_021324427.2 None
Blue background indicates that the domain is not in the aligned region.

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