DRSC/TRiP Functional Genomics Resources

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Protein Alignment fliI and svila

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_021335686.1 Gene:svila / 30112 ZFINID:ZDB-GENE-990706-5 Length:2264 Species:Danio rerio


Alignment Length:1547 Identity:328/1547 - (21%)
Similarity:555/1547 - (35%) Gaps:490/1547 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PFVRGVDFTKNDFSATFPSS--MRQMSRVQWLTLDRTQLAEI----PEELGHLQ-KLEHLSLNHN 62
            |.:.....||:...|:...|  :|:.:|...|..:.|:....    |.|.||.: .|..|:|   
Zfish   807 PTLVSTSVTKHSLQASSQQSSMVREQAREVRLAQEATETDRARHASPGEGGHEEPDLSTLTL--- 868

  Fly    63 RLEK--IFGELTELSC----------LRSLDLRH-------NQLKNSGIPPELFHLE---ELTTL 105
             .||  :|..|.:.|.          .|..:.|:       .:::..|...|:|..|   .:...
Zfish   869 -AEKMALFNRLAQPSSHGSRARGDTRARRSNARYQTQPITLGEVEQDGSGSEMFDEESEFSMCLS 932

  Fly   106 DLSHNKLKEVPEGLERAKNLIVLNLSNNQIESIPTPLFIHLTDLLFLDLSHNRLETLPPQTRRLI 170
            ||.|.:    |.|..|      ...|:|......|....|..|:..         |:|..:....
Zfish   933 DLEHFQ----PAGGAR------FAPSSNSAMRSSTVSTEHAGDIHL---------TMPNVSGPAY 978

  Fly   171 NLKTLDLSHNPLELFQLRQLPSLQSLEVLKMSGTQRTLLNFPTSI------------DSLA---- 219
            ..:|:...|:|....:::...||...|.|.:|..:|.|.: |.|:            ||.|    
Zfish   979 YEQTVSPPHHPQPAHEIQTHQSLAEGERLLLSTGKRKLPS-PDSVKRTPHAQPARDWDSKAVAVT 1042

  Fly   220 --NLCELDLSHNSLPKLPDCVYNVVTLVRLNL--------------SD------NELTELTAG-- 260
              :|.:.|..|.:  .||  |:....:..|..              ||      :||:::.:.  
Zfish  1043 SQDLSQTDGEHTT--DLP--VHTAAAVSALQSHSLHEDHTREEEQESDFKTEDGDELSDVMSARQ 1103

  Fly   261 VELWQRLESLNLS-----RNQL--------VALPAALCKLPKLRRLLVNDNKLNFEGIPSGIGKL 312
            :.:.:||..|..|     ||::        ||:.....:|.::.:        :|:....|:   
Zfish  1104 MSIKERLALLKKSGEEDWRNRINKKQDVVKVAVSERHAQLWEVEQ--------SFKKKDDGM--- 1157

  Fly   313 GALEVFSAANNLLEMVPEGLCRCGALKQLNLSCNRLITLPDAIHLLEGLDQLDLRNNPELVMPP- 376
             .::.|:.::.|.:.|......|.:                     |.|||  :.|.|:..:.| 
Zfish  1158 -MIDDFAVSDQLWDPVFSSSLLCAS---------------------EPLDQ--IANLPKATLLPV 1198

  Fly   377 ------------KPSEASKATSLEFYNIDFSLQ------------------------TQLRLAGA 405
                        ..:|..::..||  .::.|:|                        ||..:||.
Zfish  1199 QVDERHPWRRKKMGNEVVESQQLE--RVEMSIQERKQLITSQEEAWKAKGYGAANDSTQFTVAGR 1261

  Fly   406 AVPPSMPSSATPKDSTARKIRLRRGPRSEGDQDAAKVLKGMKDVAKDKDNEAGAVPEDGKPESLK 470
            .|...:   |.|...|...:    .|.|..:::.:..:        .|.:|...|.::.|.||  
Zfish  1262 MVKKGL---AAPSVLTNPVL----SPLSSKNKNTSHTI--------TKPHEEIEVKQNMKLES-- 1309

  Fly   471 PKRWDESLEKPQLDYSKFFEKDDGQLPGL---TIWEIENFLPN--KIEEVVHGKFY---EGDCYI 527
                |..|||    ...|..:.:.::|||   ||...|..:..  .:::.|..|||   |.....
Zfish  1310 ----DMKLEK----LETFLGRLNSKVPGLQEATIAVTEKSVKEVMTLDDEVFDKFYRHAEDMAKF 1366

  Fly   528 VLKTKFDDLGLLDWEIFFWI-----GNEATLDKRACAAIHAV-NLRNFLGARCRTVREE-QGDES 585
            ..:.:..|    |::..|.:     .:|....|||......| :.:|.|  :...|||: :.:.:
Zfish  1367 TSRVEISD----DFDDIFGVQLPRLTSEMVQHKRAVRPTRNVQSSKNPL--KMLAVREDIRHEYT 1425

  Fly   586 EQFLS--LFETEVIYIEGGRTATGFYTI--------EEMIHIT-------------------RLY 621
            ||.|:  |.|::.:..|.....:||..:        |....::                   :|.
Zfish  1426 EQRLNIGLLESKRMKQEKMNKNSGFSEVALAGLASKENFSSVSLRSVNASEQSSNNSAMPYKKLM 1490

  Fly   622 LVHAYGATIHLEP--VAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTER 684
            |:...|.. |::.  |.|..:||:....|:|....|.:||:||.:.....:||..:|..: :|:.
Zfish  1491 LIQVKGRR-HVQTRLVEPRASSLNSGDCFLLITPHHCFIWIGEFANVIEKAKAAELATFV-QTKH 1553

  Fly   685 KNKCEIQLERQGEESA--------EFWQGLGMTSEEADAAEPPKEHVPEDYQPVQPRLYQVQLGM 741
            ...|.....:..||.|        :||:.||..:....|..|.::...|........:|:     
Zfish  1554 DLGCRASYVQTIEEGANTHTHAAKDFWKILGGQTSYQSAGTPEQDEFYESAVVETNCIYR----- 1613

  Fly   742 GYLELPQVELPEQKL------------CHTLLNSKHVYILDCYTDLFVWFGKKSTRLVRAAAVKL 794
                     |.|.||            | ::||.|.|.:.|..::::||.||:.|...|..|.:|
Zfish  1614 ---------LMEDKLVPHDDYWGRVPRC-SMLNPKEVLVFDFGSEVYVWHGKEVTLAQRKVAFQL 1668

  Fly   795 SRELF-----------NMMD--------------RPDYALVMRVPEGNEMQIFRTKFAGWDEVMA 834
            ::.|:           |.:|              |||:|:..|:.:.||..:|:.||..|.:   
Zfish  1669 AKHLWNGTFDYTNCDINPLDPGECNALIPRKGQGRPDWAVFGRLTQHNETTLFKEKFLDWSD--- 1730

  Fly   835 VDFTRTAKSVAKTG------------------ANLTQWARQQETRTDLAALFMPRQSAMPLAEAE 881
                  :|:..|.|                  |:|...|.:...||.|..:.:.|  ...|.|. 
Zfish  1731 ------SKNSKKNGDLHVENKELRSGECRPYDASLMLSALRAPVRTVLDGVNIGR--GYGLVEG- 1786

  Fly   882 QLEEEWNYDLEMMEAFVLENKKF--VRLPEEELGRFYTGECYVFLCRYCIPIEEPENGSEDGANP 944
              ||..|:::..:...|....:|  .|||::.:|:|:.|:.||...:|.|               
Zfish  1787 --EEGRNFEISTLSVDVWHILEFDYSRLPKQSIGQFHEGDTYVVKWKYMI--------------- 1834

  Fly   945 AADVSKSSANNQPEDEI------QCVVYFWQGRNAGNMGWLTFTFTLQKK-FKAMFGEELE---- 998
                |::.......:.|      :|..:||||||:          |:.:| ..|:...||:    
Zfish  1835 ----SRAVGKRLHSERIIGPGKEKCCYFFWQGRNS----------TVNEKGTSALMTVELDEERG 1885

  Fly   999 -VVRIFQQQENLKFMSHFKRKFIIHTGKRKD---------KAHTAKGKSPVEFFHLRSNGGALTT 1053
             .|::.|.:|...|:..|....|:|.|||::         :.:..:|:.|:|...|.:       
Zfish  1886 AQVQVQQGKEPPCFLQCFNGGMIVHAGKREEEEDNTQNDWRLYCVRGEKPIEGHLLEA------- 1943

  Fly  1054 RLIQINPDAVHLNS----TFCYILHVPFETEDDSQSGIVYVWIGSKA------------------ 1096
                    ..|.:|    |...:|::|        ...:|:|.|.||                  
Zfish  1944 --------VCHCSSLRSRTSMILLNIP--------KASLYLWHGCKAQVHTRDVGRTTANKIKEQ 1992

  Fly  1097 CNEEAKLVQDIAEQMFNSPWVSLQILNEGDEPENFFWVALG--GRKPYD---TDAEYMNYT-RLF 1155
            |..||.|        .:|..||:|..:||.||:. ||.|||  .||.||   .|....|:| |||
Zfish  1993 CPLEAGL--------HSSSKVSIQECDEGAEPQG-FWEALGKRDRKAYDCMLQDPGKFNFTPRLF 2048

  Fly  1156 RCSNERGYYTVAE-----------KCADFCQDDL---ADDDIMILDNGEHVFLWMG--PRCSEV- 1203
            :.|:..|.:...|           ....|.|:||   ....:.::||...|:||.|  |:.||. 
Zfish  2049 QLSSASGEFAAVEFVYPSREPNLVNSMPFLQEDLYTATQPALFLVDNHHEVYLWQGWWPQDSEST 2113

  Fly  1204 -EVKLAYKS-----AQVYIQHMRIKQPERPRKLFLTMKNKESRRFTKCFHGW 1249
             ..::.:.|     .:..:|:.:.|..::..|.:|.....|...||..|..|
Zfish  2114 GSARIRWDSDRKCAMETVLQYSKEKNEKKTPKSYLIHAGLEPLTFTNMFPSW 2165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380 5/24 (21%)
leucine-rich repeat 31..53 CDD:275380 6/26 (23%)
LRR_8 53..112 CDD:290566 17/80 (21%)
leucine-rich repeat 54..76 CDD:275380 7/23 (30%)
LRR_RI 70..304 CDD:238064 57/306 (19%)
leucine-rich repeat 77..101 CDD:275380 6/33 (18%)
LRR_8 101..159 CDD:290566 11/57 (19%)
leucine-rich repeat 102..124 CDD:275380 6/21 (29%)
leucine-rich repeat 125..148 CDD:275380 4/22 (18%)
leucine-rich repeat 149..171 CDD:275380 2/21 (10%)
LRR_8 152..231 CDD:290566 20/96 (21%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..220 CDD:275380 10/41 (24%)
leucine-rich repeat 221..243 CDD:275380 6/21 (29%)
LRR_8 243..300 CDD:290566 14/91 (15%)
leucine-rich repeat 244..266 CDD:275380 5/43 (12%)
leucine-rich repeat 267..289 CDD:275380 8/34 (24%)
leucine-rich repeat 290..314 CDD:275380 2/23 (9%)
LRR_8 315..370 CDD:290566 9/54 (17%)
leucine-rich repeat 315..335 CDD:275380 3/19 (16%)
leucine-rich repeat 338..360 CDD:275378 0/21 (0%)
gelsolin_S1_like 491..602 CDD:200446 30/127 (24%)
gelsolin_like 618..706 CDD:200436 25/116 (22%)
gelsolin_S3_like 729..828 CDD:200448 32/135 (24%)
gelsolin_like 920..1015 CDD:200436 22/106 (21%)
gelsolin_S5_like 1037..1141 CDD:200444 31/127 (24%)
gelsolin_S6_like 1151..1250 CDD:200447 30/123 (24%)
svilaXP_021335686.1 gelsolin_S2_like 1488..1584 CDD:200445 25/97 (26%)
gelsolin_like 1609..1709 CDD:200436 26/114 (23%)
gelsolin_S4_like 1792..1903 CDD:200449 30/139 (22%)
gelsolin_S5_like 1925..2028 CDD:200444 31/134 (23%)
ADF_gelsolin 2045..2166 CDD:326633 29/121 (24%)
VHP 2223..2264 CDD:308044
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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