DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and Vill

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001178546.2 Gene:Vill / 301057 RGDID:1304843 Length:857 Species:Rattus norvegicus


Alignment Length:798 Identity:194/798 - (24%)
Similarity:320/798 - (40%) Gaps:148/798 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 LTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKT-KFDDLGLLDWEIFFWIGNEATLDKRACAAIH 562
            |.||..||.....:.|..||.|:|..||:||.: |....|..|  :..|||.||:.:.:..|...
  Rat    16 LQIWITENLKMLPLPEKAHGNFFEECCYVVLHSPKATQGGSRD--LHCWIGKEASTEAQEAAVSF 78

  Fly   563 AVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGGRTA------TGFYTIEEMIHITRLY 621
            ...|:..||.:....||.||.||:.|.|.|...|||.:|||.:      :..|.::.::||....
  Rat    79 MHRLQQDLGDQTVLHRESQGHESDCFHSYFRPGVIYRKGGRASALKLGESNVYNVQRLLHIRGRK 143

  Fly   622 LVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTERKN 686
            .|.|       ..||.:..|.:....|:||||..:..|.|.::.....::|..:...:...||..
  Rat   144 HVSA-------TEVALSWNSFNKGDIFLLDLGKVMIQWNGPKASICEKARALSLTCSLRDRERGG 201

  Fly   687 KCEIQL---ERQGEESAEFWQG-LGMTSEEADAAEPPKEHVPEDYQPVQPRLYQV-QLGMGYLEL 746
            :.:|::   |.:..:.....:. ||..|....|:.|  .:.....|....|||.| :.|   .:|
  Rat   202 RAQIRVVDAENKATDLMSIMEAVLGRRSGSLCASVP--SNSVSQLQKANIRLYHVFEKG---TDL 261

  Fly   747 PQVELPEQKLCHTLLNSKHVYILD-CYTDLFVWFGKKSTRLVRAAAVKLSRELFNMMDRPDYALV 810
            ...||..:.|...||.....|:|| ....:::|.|:||:...|.||...:.........|:|..|
  Rat   262 VVQELATRPLTQDLLQEDGCYLLDQGGFKIYMWQGRKSSPEERKAAFSRAVGFIQAKGYPNYTNV 326

  Fly   811 MRVPEGNEMQIFRTKFAGWD-EVMAVDFTRTAKSVAKTGANLTQWARQQETRTDLAALFMPRQSA 874
            ..|.:|.|...|:..|..|. |:......|.:|.:.:....:    .:..|:.:|||        
  Rat   327 EVVNDGAESTAFQQLFWTWSKELNGKKHPRQSKLMQQVNLEV----GKLHTQPELAA-------- 379

  Fly   875 MPLAEAEQLEEEWNYDLEM-------MEAFVLENKKFVRLPEEELGRFYTGECYVFLCRYCIPIE 932
                           .|.|       :|.:.::..:...:..:..|:..:|.||:.|.:|     
  Rat   380 ---------------QLRMVDDGSGKVEVWYIQGSQRQPVDPKHHGQLCSGNCYLVLYKY----- 424

  Fly   933 EPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNAGNMGWLTFTFTLQKKFKAM--FGE 995
                                   |....:|.::|.|||..:          |:: ..||:  ..|
  Rat   425 -----------------------QKLGRVQYILYLWQGHQS----------TVE-DVKALNCNAE 455

  Fly   996 ELEVV--------RIFQQQENLKFMSHFKRKFIIHTGKRKDKAHTAKGKSPV---EFFHLRSNGG 1049
            ||:::        .:...:|...|::.|:.:.::..|...:|.    |:.|:   ..||::.. .
  Rat   456 ELDLLHQGALVQGHVTMGREPPHFLAIFQGQLVVLQGNAGNKG----GRLPISDTRLFHVQGT-E 515

  Fly  1050 ALTTRLIQINPDAVHLNSTFCYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQDIAEQMFNS 1114
            :..||.:::...|..|.|:..:.|         ..|.:.|:|.| |.|:.:.:.:......:|  
  Rat   516 SHNTRTMEVPARASSLTSSDVFFL---------ITSHVCYLWFG-KGCHGDQREMARTVVTVF-- 568

  Fly  1115 PWVSLQILNEGDEPENFFWVALGGRKPYDTDAEYMN-----YTRLFRCSNERGYYTVAEKCADFC 1174
            |..:.:.:.||.||.: ||.|||||.||.::.....     ..|||.||:..|:..:.| ...|.
  Rat   569 PGNNKETVLEGQEPLH-FWEALGGRAPYPSNKRLPEEISSIQPRLFECSSHSGHLVLTE-VVFFG 631

  Fly  1175 QDDLADDDIMILDNGEHVFLWMGPRCSEVEVKLAYKSAQVYIQHMRIKQPERPRKL----FLTMK 1235
            |:||...|||:||..:.:|||:|....|      :|.|.|...|..::.....|.|    .:..:
  Rat   632 QEDLDKYDIMLLDTCQEIFLWLGEAAGE------WKKAAVAWGHEYLRTHPAERSLATPIIVVKQ 690

  Fly  1236 NKESRRFTKCFHGWSAFK 1253
            .:|...||..|..|..:|
  Rat   691 GREPATFTGWFVTWDPYK 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 38/103 (37%)
gelsolin_like 618..706 CDD:200436 17/91 (19%)
gelsolin_S3_like 729..828 CDD:200448 29/100 (29%)
gelsolin_like 920..1015 CDD:200436 18/104 (17%)
gelsolin_S5_like 1037..1141 CDD:200444 28/106 (26%)
gelsolin_S6_like 1151..1250 CDD:200447 31/102 (30%)
VillNP_001178546.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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