DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and Svil

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_006525852.1 Gene:Svil / 225115 MGIID:2147319 Length:2187 Species:Mus musculus


Alignment Length:1040 Identity:222/1040 - (21%)
Similarity:389/1040 - (37%) Gaps:315/1040 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   398 TQLRLAGAAVPPSM--PSSATPKDSTARKIRLRRGPRSEGDQDAAKVLKGMK---------DVAK 451
            ||..:||..|...:  |:|.||..|....       :|.|....:|.|:.::         |:..
Mouse  1183 TQFTVAGRMVKKGLASPTSITPISSPLCS-------KSRGTTPVSKPLEDIEARPDMQLESDLKL 1240

  Fly   452 DK--------DNEAGAVPE-----DGKPESLKPKRWDESLEKPQLD----YSKFFEKDDGQLPGL 499
            |:        :|:...:.|     .||  |:|        |..:||    ::||:...|..:|..
Mouse  1241 DRLETFLRRLNNKVAGIQETVLTVTGK--SVK--------EVMKLDDDETFAKFYRSVDHSIPRS 1295

  Fly   500 TIWEIEN--------FLPNKIEEVVHGK--------FYEGDCYIVLKTKFDDLGLLDW-----EI 543
            .: |:|.        :.|.....|...|        .......:.|....||| |.::     .:
Mouse  1296 PV-ELEEDFDVIFDPYAPKLTSSVAEHKRQVRPKRRVQASKNPLKLLAARDDL-LQEYTEQRLNV 1358

  Fly   544 FFWIGNEATLDKRAC-AAIHAVNL------RNFLGARCRTVREEQGDESEQFLSLFETEVIYIEG 601
            .|.......::|.:. :....|.|      .||.....|:|...:.:.:...:...:..::.|:|
Mouse  1359 AFMESKRMKVEKMSSNSNFSEVTLAGLASRENFSNINLRSVNLMEQNSNNSAMPYKKLMLLQIKG 1423

  Fly   602 GRTATGFYTIEEMIHI-TRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSK 665
            .|            |: |||              |.|..:||:....|:|....:.::|:||.|.
Mouse  1424 RR------------HVQTRL--------------VEPRASSLNSGDCFLLLSPQYCFLWVGEFSN 1462

  Fly   666 NTLNSKARLMAEKISKTERKNKCE---IQLERQG-----EESAEFWQGLGMTSEEADAAEPPKEH 722
            ....:||..:|..| :|:|:..|.   ||...:|     ..:.:||:.||..:....|.:|.:: 
Mouse  1463 VIEKAKASELATLI-QTKRELGCRATYIQTIEEGINTHTHAAKDFWKLLGGQTSYQSAGDPKED- 1525

  Fly   723 VPEDYQPVQPRLYQVQLGMGYLELPQV-ELPEQKL------------CHTLLNSKHVYILDCYTD 774
                      .||:..:    :|...| .|.:.||            | :||.||.|.:.|..::
Mouse  1526 ----------ELYETAI----IETNCVYRLTDDKLVPDDDYWGKIPKC-SLLQSKEVLVFDFGSE 1575

  Fly   775 LFVWFGKKSTRLVRAAAVKLSRELF-----------NMMD--------------RPDYALVMRVP 814
            ::||.||:.|...|..|.:|::.|:           |.:|              |||:|:..||.
Mouse  1576 VYVWHGKEVTLAQRKIAFQLAKHLWNGTFDYENCDINPLDPGECNPLIPRKGQGRPDWAIFGRVT 1640

  Fly   815 EGNEMQIFRTKFAGWDEVMAVDFTRTAKSVAKTGANLTQWARQQETRTDLAALFMPRQSAMPLAE 879
            |.||..:|:.||..|.|:        .:...|....:.|  ::.:.|.|:....:.|..|.|...
Mouse  1641 EHNETILFKEKFLDWTEL--------KRPTEKNSGEVVQ--QKDDPRADVKPYDVTRMVATPQIT 1695

  Fly   880 AEQL---------------EEEWNYDLEMMEAFVLENKKF--VRLPEEELGRFYTGECYVFLCRY 927
            |..:               ::...:::..:...|....:|  .|||.:.:|:|:.|:.||...:|
Mouse  1696 AGTILDGVNVGRGYGLVEGDDRRQFEIATVSVDVWHILEFDYSRLPRQSIGQFHEGDAYVVKWKY 1760

  Fly   928 CIPIEEPENGSEDGANPAADVSKSSANNQPEDEI-------QCVVYFWQGRNAGNMGWLTFTFTL 985
            .                   .|.:..:.|..:.:       :||.:|||||::          |:
Mouse  1761 M-------------------ASTAVGSRQKGEHLVRVAGKEKCVYFFWQGRHS----------TV 1796

  Fly   986 QKK-FKAMFGEELE-----VVRIFQQQENLKFMSHFKRKFIIHTGKRKD---------KAHTAKG 1035
            .:| ..|:...||:     .|::.|.:|...|:..|:...::|:|:|::         :.:..:|
Mouse  1797 SEKGTSALMTVELDEERGAQVQVLQGKEPPCFLQCFQGGMVVHSGRREEEEENVQSEWRLYCVRG 1861

  Fly  1036 KSPVEFFHLRSNGGALTTRLIQINPDAVHLNS----TFCYILHVPFETEDDSQSGIVYVWIGSKA 1096
            :.|:|            ..|:::   |.|.:|    |...:|::        ...::|:|.|.||
Mouse  1862 EVPME------------GNLLEV---ACHCSSLRSRTSMVVLNI--------NKALIYLWHGCKA 1903

  Fly  1097 CNEEAKLVQDIAEQ----------MFNSPWVSLQILNEGDEPENFFWVALG--GRKPYD---TDA 1146
            .....::.:..|.:          :.:|..|::...:||.||.. ||.|||  .||.||   .|.
Mouse  1904 QGHTKEVGRTAANKIKEECPLEAGLHSSSNVTIHECDEGSEPLG-FWDALGRRDRKAYDCMLQDP 1967

  Fly  1147 EYMNYT-RLFRCSNERGYYTVAE-----------KCADFCQDDL---ADDDIMILDNGEHVFLWM 1196
            ...|:. |||..|:..|.::..|           ....|.|:||   ....:.::||...|:||.
Mouse  1968 GSFNFAPRLFILSSSSGDFSATEFVYPAQAPSAVSSMPFLQEDLYSAPQPALFLVDNHHEVYLWQ 2032

  Fly  1197 GPRCSEVEV------------KLAYKSAQVYIQHMRIKQPERPRKLFLTMKNKESRRFTKCFHGW 1249
            |...:|.::            |.|.::...|.:...:|:|  |.|.:|.....|...||..|..|
Mouse  2033 GWWPTENKITGSARIRWASDRKSAMETVLQYCRGKNLKRP--PPKSYLIHAGLEPLTFTNMFPSW 2095

  Fly  1250  1249
            Mouse  2096  2095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 21/138 (15%)
gelsolin_like 618..706 CDD:200436 25/95 (26%)
gelsolin_S3_like 729..828 CDD:200448 37/136 (27%)
gelsolin_like 920..1015 CDD:200436 21/107 (20%)
gelsolin_S5_like 1037..1141 CDD:200444 26/119 (22%)
gelsolin_S6_like 1151..1250 CDD:200447 30/126 (24%)
SvilXP_006525852.1 gelsolin_S2_like 1415..1511 CDD:200445 29/122 (24%)
gelsolin_like 1536..1636 CDD:200436 26/100 (26%)
gelsolin_S4_like 1719..1832 CDD:200449 29/141 (21%)
gelsolin_S5_like 1852..1957 CDD:200444 26/128 (20%)
ADF_gelsolin 1974..2096 CDD:417759 30/124 (24%)
VHP 2152..2187 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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