DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and Vill

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_006512122.1 Gene:Vill / 22351 MGIID:1201781 Length:865 Species:Mus musculus


Alignment Length:825 Identity:200/825 - (24%)
Similarity:327/825 - (39%) Gaps:156/825 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 DESLEKPQLDYSKFFEKDDGQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVL----KTKFDD 535
            |.:.:.|.:|..:          .|.||..||.....:.|..||.|:|..||:||    ..|...
Mouse     2 DINQDLPAIDSHR----------ALQIWITENLKMLPLPERAHGNFFEECCYVVLHVPQSPKATQ 56

  Fly   536 LGLLDWEIFFWIGNEATLDKRACAAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIE 600
            .|..|  :.:|||.:|:.:.|..|......|:..||.:....||.||.||:.|.|.|...|||.:
Mouse    57 GGFSD--LHYWIGKDASAEAREAAVSFVQCLQEDLGDQTVLHRESQGHESDCFHSYFHPGVIYRK 119

  Fly   601 GGRTA------TGFYTIEEMIHITRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIW 659
            |||.:      |..|.::.::||.....|.|       ..||.:..|.:....|:||||..:..|
Mouse   120 GGRDSALKFAETNMYNVQRLLHIRGRKHVSA-------TEVALSWNSFNKGDIFLLDLGKVMIQW 177

  Fly   660 MGERSKNTLNSKARLMAEKISKTERKNKCEIQLERQGEESAEFWQ----GLGMTSEEADAAEPPK 720
            .|.::..:..::|..:...:...||..:.:|.:.....|:....:    .||..|.....:.|  
Mouse   178 NGPKASISEKARALTLTCNLRDRERGGRAQIAVVDAENEATNLLRIMEAVLGCRSGSLCPSVP-- 240

  Fly   721 EHVPEDYQPVQPRLYQV-QLGMGYLELPQVELPEQKLCHTLLNSKHVYILD-CYTDLFVWFGKKS 783
            .:.....|....|||.| :.|   .:|...||..:.|...||.....|:|| ....:::|.|:||
Mouse   241 SNSVSQLQKANVRLYHVCEKG---TDLVVQELATRPLTQDLLQEDGCYLLDQGGFKIYMWQGRKS 302

  Fly   784 TRLVRAAAVKLSRELFNMMDRPDYALVMRVPEGNEMQIFRTKFAGWDEVMAVDFTRTAKSVAKTG 848
            :...:.||:..:.........|:|..|..|.:|.|...|:..|..|.:  .:|..:..:......
Mouse   303 SPQEKKAALSRAVGFIQAKGYPNYTNVEVVNDGAESTAFQQLFWSWSK--ELDRKKHPEKSKLVQ 365

  Fly   849 ANLTQWARQQETRTDLAALFMPRQSAMPLAEAEQLEEEWNYDLEMMEAFVLENKKFVRLP--EEE 911
            .||.  ..:..|:.:|||     |..|....:.::|..:..||:             |.|  .:.
Mouse   366 GNLE--VGKLHTQPELAA-----QLRMVDDGSGKVEVWYIQDLQ-------------RQPVHPKY 410

  Fly   912 LGRFYTGECYVFLCRYCIPIEEPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNAGNM 976
            .|:..:|.||:.|..|                            |....:|.::|.|||..:   
Mouse   411 YGQLCSGNCYLVLYTY----------------------------QKLGCVQYLLYLWQGHQS--- 444

  Fly   977 GWLTFTFTLQKKFKAM--FGEELEVV--------RIFQQQENLKFMSHFKRKFIIHTGKRKDKAH 1031
                   |::.. ||:  ..|||:::        .:....|...|::.|:.:.::..|...:   
Mouse   445 -------TVEDT-KALNCSAEELDLMHQGALAQGHVTMGSEPPHFLAIFQGRLVVFQGNAGN--- 498

  Fly  1032 TAKGKSP----VEFFHLRSNGGALTTRLIQINPDAVHLNSTFCYILHVPFETEDDSQSGIVYVWI 1092
              ||:.|    ...||::.. .:..||.:::...|..|.|...:.|         ..|.:.|:|.
Mouse   499 --KGERPPVSDTRLFHVQGT-ESHNTRTMEVPARASSLTSGDVFFL---------ITSHVCYLWF 551

  Fly  1093 GSKACNEEAKLVQDIAEQMFNSPWVSLQILNEGDEPENFFWVALGGRKPYDTDAE-----YMNYT 1152
            | |.|:.:.:.:......:|  |..:.:.:.||.|| .:||.|||||.||.::..     :....
Mouse   552 G-KGCHGDQREMARTVVSVF--PGNNKETVLEGQEP-LYFWEALGGRAPYPSNKRLPEEVWSIQP 612

  Fly  1153 RLFRCSNERGYYTVAEKCADFCQDDLADDDIMILDNGE------HVFLWMGPRCSEVEVKLAYKS 1211
            |||.||:..|...:.| ...|.|:||...|||:||..:      .:|||:|....|.:     |.
Mouse   613 RLFECSSHAGCLVLTE-VLFFGQEDLDKYDIMLLDTCQEASSVAQIFLWLGEAAGEWK-----KE 671

  Fly  1212 AQVY-IQHMRIKQPER--PRKLFLTMKNKESRRFTKCFHGWSAFK 1253
            |..: ::::|....||  ...:|:..:..|...||..|..|..:|
Mouse   672 AVAWGLEYLRTHPAERSLATPIFVVKQGHEPATFTGWFVTWDPYK 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 38/114 (33%)
gelsolin_like 618..706 CDD:200436 17/91 (19%)
gelsolin_S3_like 729..828 CDD:200448 28/100 (28%)
gelsolin_like 920..1015 CDD:200436 18/104 (17%)
gelsolin_S5_like 1037..1141 CDD:200444 28/107 (26%)
gelsolin_S6_like 1151..1250 CDD:200447 31/107 (29%)
VillXP_006512122.1 ADF_gelsolin 16..121 CDD:387665 38/106 (36%)
gelsolin_S2_like 136..229 CDD:200445 19/99 (19%)
gelsolin_S3_like 249..345 CDD:200448 27/98 (28%)
gelsolin_S4_like 385..485 CDD:200449 26/151 (17%)
gelsolin_S5_like 508..596 CDD:200444 27/101 (27%)
gelsolin_S6_like 611..713 CDD:200447 31/107 (29%)
VHP 830..>850 CDD:366982
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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