DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fliI and avil

DIOPT Version :10

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_031753040.1 Gene:avil / 100486464 XenbaseID:XB-GENE-489888 Length:819 Species:Xenopus tropicalis


Alignment Length:792 Identity:221/792 - (27%)
Similarity:348/792 - (43%) Gaps:112/792 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 KDDGQLPGLTIWEIEN----FLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGNEA 551
            ||..:.|||.||.||.    .:|.|.|    |.|||||||::|.||.....|. ::|.:|||.|:
 Frog     8 KDVNKSPGLIIWRIEKMDLVLVPKKAE----GNFYEGDCYLLLHTKKSGSSLF-YDIHYWIGKES 67

  Fly   552 TLDKRACAAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGG------RTATGFYT 610
            :.|:::..||:.|.|.::||......||.||.||:.|...|:..:||.:||      ...|..|.
 Frog    68 SKDEQSSVAIYTVQLDDYLGGSPVQHREVQGYESDCFRGYFKQGIIYKKGGVASGMKHVETNTYD 132

  Fly   611 IEEMIHITRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLM 675
            ::.::|:.....|.|....:..|       |.:....|:||||..:..|.|.:|......|..|:
 Frog   133 VKRLLHVKGKRNVTATEVDLSWE-------SFNSGDVFLLDLGRTVIQWNGAKSNMAERIKGMLL 190

  Fly   676 AEKISKTERKNKCEIQLERQGEESAE------FWQGLGMTSEEADAAEPPKEHVPEDYQPVQPRL 734
            |:.|...||..:.:|::....:|.|.      ....:|..:.......|  :.|.:..|.....|
 Frog   191 AKDIRDRERGGRMDIRVIEGDQEDASPELRDLLINTIGKRTHNIGPGTP--DEVADQKQKANIML 253

  Fly   735 YQVQLGMGYLELPQVELPEQKLCHTLLNSKHVYILD-CYTDLFVWFGKKSTRLVRAAAVKLSREL 798
            |.|....|.:|:  .|:..:.|...|||....||:| ..|.::||.||.:|:..:..|:..:.|.
 Frog   254 YHVSDSGGQMEV--TEVATRPLVQDLLNHNDCYIIDQGGTKIYVWKGKGATKAEKLTAMSKALEF 316

  Fly   799 FNMMDRPDYALVMRVPEGNEMQIFRTKFAGW---DEVMAVDFTRTAKSVAKTGANLTQWARQQET 860
            ..|...|....|..|.:|.|..:|:..|..|   |:.:.:........:||..        |::.
 Frog   317 IKMKAYPHSTNVETVNDGAESAMFKQLFQKWVVKDQSVGMGKAYIVNKIAKVS--------QEKF 373

  Fly   861 RTDLAALFMPRQSAMP-LAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYVFL 924
            .|.|.       .|.| :|..|::.::.:..:|:..   :||.:.|.:..:..|.||.|:||:.|
 Frog   374 DTSLL-------HANPAVAAQERMVDDGSGKVEVWR---IENLELVPVETQWHGYFYGGDCYLVL 428

  Fly   925 CRYCIPIEEPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNAGNMGWLTFTFTLQKKF 989
            ..|                   .|:|.:.:         |||.||||:| :...|..:..|..|.
 Frog   429 YTY-------------------HVNKKAHH---------VVYIWQGRHA-SQDELAASAFLAVKL 464

  Fly   990 KAMFGEELEVVRIFQQQENLKFMSHFKRKFIIHTGKRKDKAHTAKGKSPVEFFHLRSNGGA--LT 1052
            ...||.|...||:...:|...||:.||.|.:|..|....|.:    |.|.....|....|:  ..
 Frog   465 DQDFGGEPVQVRVCMGKEPRHFMAIFKGKLVIFEGGTSRKGN----KEPERLVRLFQVNGSEPSN 525

  Fly  1053 TRLIQINPDAVHLNSTFCYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQDIAEQMFNSPWV 1117
            |:.:::......|||...::|    :|:.:|     |:|.|..:..:|.::.:.:|..:...   
 Frog   526 TKAVEVPTFGSSLNSNDVFLL----KTQSES-----YLWYGKGSSGDEREMAKQLAAILSGG--- 578

  Fly  1118 SLQILNEGDEPENFFWVALGGRKPYDTDAEYMN-----YTRLFRCSNERGYYTVAEKCADFCQDD 1177
            ::::|.||.|... ||..|||:.||..|.....     :.|||.|||:.|.:.|.| ..:|.|||
 Frog   579 NVEMLAEGHETAQ-FWETLGGKAPYANDKRLQQEVTDFHPRLFECSNKTGRFIVTE-VTNFNQDD 641

  Fly  1178 LADDDIMILDNGEHVFLWMGPRCSEVEVKLAYKSAQVYIQ-HMRIKQPERPRKLFLTMKNKESRR 1241
            |...|:||||..:.:|||:|...:::|.|.|..:||.|:: |...:..|.|  :.:..:..|...
 Frog   642 LEQTDVMILDTWDQIFLWIGSEANDIEKKEALTTAQEYLKTHPSGRDSETP--ILIVKQGFEPPI 704

  Fly  1242 FTKCFHGWSAFK 1253
            ||..|..|...|
 Frog   705 FTGWFLAWDPQK 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR 33..405 CDD:443914
leucine-rich repeat 54..76 CDD:275380
leucine-rich repeat 77..101 CDD:275380
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 46/114 (40%)
gelsolin_like 618..706 CDD:200436 21/93 (23%)
gelsolin_S3_like 729..828 CDD:200448 29/99 (29%)
gelsolin_like 920..1015 CDD:200436 25/94 (27%)
gelsolin_S5_like 1037..1141 CDD:200444 24/105 (23%)
gelsolin_S6_like 1151..1250 CDD:200447 36/99 (36%)
avilXP_031753040.1 gelsolin_S1_like 7..118 CDD:200446 46/114 (40%)
gelsolin_S2_like 133..219 CDD:200445 22/92 (24%)
gelsolin_S3_like 248..346 CDD:200448 29/99 (29%)
gelsolin_S4_like 390..490 CDD:200449 33/131 (25%)
gelsolin_S5_like 513..601 CDD:200444 23/100 (23%)
gelsolin_S6_like 616..713 CDD:200447 36/99 (36%)
VHP 784..819 CDD:460493
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.