DRSC/TRiP Functional Genomics Resources

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Protein Alignment fliI and svil

DIOPT Version :9

Sequence 1:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_012821108.1 Gene:svil / 100037851 XenbaseID:XB-GENE-494405 Length:2322 Species:Xenopus tropicalis


Alignment Length:1602 Identity:328/1602 - (20%)
Similarity:565/1602 - (35%) Gaps:537/1602 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVLPFVRGVDFTKNDF------SATFPSSMRQMSRVQWLTLDRTQLAEIPEELGHLQKLEHLSLN 60
            :.||.:.....||:..      :::..|::.:...:|....|...:.|.|:. ..|...|.::| 
 Frog   812 TALPRIPSPTVTKSSVHHISLQASSHKSTISKQEEIQKEIHDDQSIPEEPDN-SSLSLAEKMAL- 874

  Fly    61 HNRLEKIFGELT-ELSCLRSLDLRH-----------------NQLKNSG--IPPELFHLEELTTL 105
               ..|:...:| |:|....:|:|.                 .|.||.|  |.|           
 Frog   875 ---FNKLSQPITKEVSTRSRMDIRQRRMNARYQTQPVTLVEVEQYKNGGEKIGP----------- 925

  Fly   106 DLSHNKLKEV-----------PEGLERAKNLIVLNLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159
             |||:.:..|           |..:..||       |::..|.|.:   :..|..|.    |..|
 Frog   926 -LSHSVVTSVATLTSRPSPVSPGDMHTAK-------SSSYEERISS---VSSTSALL----HTSL 975

  Fly   160 ETLPPQTRRLINLKTLDLSHNPLELFQLRQLPSLQS-----------LEVLKMSGTQRTLLNFPT 213
            ||.....|.|:    |....:|         ||::.           ||..::|..:.:     :
 Frog   976 ETGSTSERSLL----LSEPWSP---------PSVKDKVYEKEPRKPMLEETRVSAAEDS-----S 1022

  Fly   214 SIDSLANLCE------LDLS----HNSLPKLPDCVYNVVTLVRLNLSDNELTELTAGVELWQRLE 268
            |....::|.:      ||::    |....|:|..|.:..:.|.| ||..:|::.....|...:.|
 Frog  1023 SFGKCSSLHKEKTHPALDVAKEEEHVEEQKVPGHVASSSSRVEL-LSPQKLSQPAEHSESQAKPE 1086

  Fly   269 S----------------------------------LNLSRNQLV-----ALPAALCKLPKLRRLL 294
            |                                  |..|..:.|     |.|||:...|:...| 
 Frog  1087 SALQVDAEDKKSLHPEPSMRRRKEIHEIVEPASELLGTSAAKTVSHTPAAAPAAVSYGPQASEL- 1150

  Fly   295 VNDNKLNFEGIPSGIGKLGALEVFSAANNLLEMVPEGLCRCGALKQLNLSCNRLITLPDAIHLLE 359
             ::.|...|          ..|:.|..:|...   |.|...|          :.:::.|.:.||:
 Frog  1151 -SEEKPEEE----------TAEISSTISNRSN---EDLDTPG----------KAMSIKDRLALLK 1191

  Fly   360 GLDQLDLRNNPELVMPPKPSEASKATSLE------FYNIDFSLQTQLRLAGAAVPPSMP------ 412
            ...:.|.:|...     |..|.||.:.:|      .:.|:.||..:..:..:...|::|      
 Frog  1192 KSGEEDWKNRLN-----KKQEYSKVSVIERSTLTQLHEIEQSLTKKEPVYASVYSPALPAAHKCQ 1251

  Fly   413 --------SSATPKDSTARKIRLRRGP------RSEGD---------------QDAAKVLKGMKD 448
                    |:||....::..:...|.|      .::|:               ::.|...||: .
 Frog  1252 YFVPIHQVSNATTLGQSSPVMFDERHPWRWKQRVTDGNGLHVSIEERKQQITVREEAWKTKGI-G 1315

  Fly   449 VAKDKD--NEAGAVPEDG-----------KPESLK-----PKRWDESLEKPQLDYSKFFEKDDGQ 495
            .|.|..  ..||.:.:.|           .|.|||     .|..:|...||.::.     :.|.:
 Frog  1316 AANDSTQFTVAGRMVKKGLASPTAITPVASPMSLKFKTPVSKPLEEIEAKPDMNL-----ESDRK 1375

  Fly   496 LPGLTIWEIENFL------------------PNKIEEVV-------HGKFYEGDCYIVLKTKFD- 534
            |.     ::|:||                  ...::||:       .|:||....:......|| 
 Frog  1376 LE-----KLESFLGKLHNRVGGLQDTTLSVTGQSVKEVMKVDDDETFGRFYRPFEFSTAHVPFDF 1435

  Fly   535 -DLGLLDWEIFFWIGNEATL------DKRACAAIHAV----NLRNFLGARCRTVREEQGDESEQF 588
             |    |:::.| ...|..|      .|||......|    |....|.||...::|.  .|:...
 Frog  1436 ED----DFDLLF-SSEEPKLTSAVAEHKRAVRPARRVQASGNPLKMLAAREDILQEY--TETRLN 1493

  Fly   589 LSLFETEVIYIE--------------GGRTATGFYTIE-EMIHIT------------RLYLVHAY 626
            ::..|::.:.:|              |..:...|.::. ..:::|            :|.||...
 Frog  1494 VAFMESKRMKVEKMSKNSNFSEVALAGLASKENFTSVSLRSVNMTEQHSNNSAVPYKKLMLVQIK 1558

  Fly   627 GATIHLEP--VAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTERKNKCE 689
            |.. |::.  |.|..:||:....|:|....|.::|:||.:.....:||..:| .|.:|:|:..|.
 Frog  1559 GRR-HVQSRLVEPRASSLNSGDCFLLITPHHCFLWVGEFANVIEKAKASELA-SIIQTKRELGCR 1621

  Fly   690 IQLERQGEE--------SAEFWQGLGMTSEEADAAEPPKEHVPED--------YQPVQPRLYQVQ 738
            ....:..||        :.:||:.|...:|...|..|.::...|:        |:.::.:|..|.
 Frog  1622 ASYVQTVEEGINTHTHGAKDFWKLLSGQTESQAAGSPEEDERYENAIIETNCIYRLLEDKLVPVD 1686

  Fly   739 LGMGYLELPQVELPEQKLCHTLLNSKHVYILDCYTDLFVWFGKKSTRLVRAAAVKLSRELF---- 799
            ...|       ::|:   | :||.||.|.:.|..::::||.||:.|...|..|.:|::.|:    
 Frog  1687 EFWG-------KVPK---C-SLLESKEVLVFDFGSEVYVWHGKEVTLAQRKVAFQLAKHLWNGAF 1740

  Fly   800 -------NMMD--------------RPDYALVMRVPEGNEMQIFRTKFAGWDEVMAVDFTRTAKS 843
                   |.:|              |||:|:..|:.|.||..:|:.||..|.|:...:    .|.
 Frog  1741 DYENCDINPLDPGECNSLIPRKGHGRPDWAIFGRLTEHNETILFKEKFLDWTEMKKPN----EKG 1801

  Fly   844 VAKTGANLTQWARQQETRTDLAALF-MPRQS------------AMPLAEAEQLEEEWNYDLEMME 895
            |.:....|.:..:......|:..:. :|::|            ...|.|.:...:   |::..:.
 Frog  1802 VCEDSPKLKEDPQSDVKPYDIMLMVPVPQKSVGTVLDGLNVARGYGLIEGDDCRQ---YEISTVS 1863

  Fly   896 AFVLENKKF--VRLPEEELGRFYTGECYVFLCRYCIPIEEPENGSEDGANPAADVSKSSANNQPE 958
            ..|....:|  .|||::.:|:|:.|:.||...:|.                   ||.:....|..
 Frog  1864 VDVWHILEFDYSRLPKQSIGQFHEGDAYVVKWKYF-------------------VSTTVGQRQKT 1909

  Fly   959 DEI------QCVVYFWQGRNAGNMGWLTFTFTLQKKFKAMFGEELE-----VVRIFQQQENLKFM 1012
            :.:      :|..:||||||:.         ..:|...|:...||:     .|::.|.:|...|:
 Frog  1910 EHVRIAGKEKCAYFFWQGRNSP---------VSEKGTSALMTVELDEERGAQVQVLQGKEPPCFL 1965

  Fly  1013 SHFKRKFIIHTGKRKD---------KAHTAKGKSPVEFFHLRSNGGALTTRLIQINPDAVHLNS- 1067
            ..|:...|:|.|:|::         :.:..:|:.|||            ..|:::   |.|.:| 
 Frog  1966 QCFQGGMIVHAGRREEEEENTQSDWRLYCVRGEVPVE------------GNLMEV---ACHCSSL 2015

  Fly  1068 ---TFCYILHVPFETEDDSQSGIVYVW-----------IGSKACN---EEAKLVQDIAEQMFNSP 1115
               |...:|.:        ...::|:|           :|..|.|   ||..|    ...:.:|.
 Frog  2016 RSRTSLILLSI--------NKALIYLWHGCKVQIHAKEVGRTAANKIKEECPL----EAGLHSSS 2068

  Fly  1116 WVSLQILNEGDEPENFFWVALG--GRKPYD---TDAEYMNYT-RLFRCSNERGYYTVAE------ 1168
            .|::...:||.||.. ||.|||  .||.||   .|....|:| |||..|:..|.:|.:|      
 Frog  2069 KVTIYECDEGSEPPG-FWDALGRRDRKAYDCMLQDPGKFNFTPRLFSLSSSSGEFTASEILYPSR 2132

  Fly  1169 -----KCADFCQDDL---ADDDIMILDNGEHVFLWMG------------------PRCSEVEVKL 1207
                 ....|.|:||   :...:.::||...|:||.|                  .|.|.:|..|
 Frog  2133 HPNVVNSMPFLQEDLYTASQPALFLVDNHHEVYLWQGWWPSENIITGSARIRWDSDRKSAMETVL 2197

  Fly  1208 AYKSAQVYIQHMRIKQPERPRKLFLTMKNKESRRFTKCFHGW 1249
            :|         .:.|..::|.|.:|.....|...||..|..|
 Frog  2198 SY---------CKGKNIKKPPKSYLIHAGLEPLTFTNMFPSW 2230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380 3/28 (11%)
leucine-rich repeat 31..53 CDD:275380 5/21 (24%)
LRR_8 53..112 CDD:290566 17/78 (22%)
leucine-rich repeat 54..76 CDD:275380 5/22 (23%)
LRR_RI 70..304 CDD:238064 62/324 (19%)
leucine-rich repeat 77..101 CDD:275380 8/42 (19%)
LRR_8 101..159 CDD:290566 13/68 (19%)
leucine-rich repeat 102..124 CDD:275380 6/32 (19%)
leucine-rich repeat 125..148 CDD:275380 3/22 (14%)
leucine-rich repeat 149..171 CDD:275380 7/21 (33%)
LRR_8 152..231 CDD:290566 18/99 (18%)
leucine-rich repeat 172..195 CDD:275380 4/22 (18%)
leucine-rich repeat 196..220 CDD:275380 4/23 (17%)
leucine-rich repeat 221..243 CDD:275380 7/31 (23%)
LRR_8 243..300 CDD:290566 17/95 (18%)
leucine-rich repeat 244..266 CDD:275380 6/21 (29%)
leucine-rich repeat 267..289 CDD:275380 9/60 (15%)
leucine-rich repeat 290..314 CDD:275380 3/23 (13%)
LRR_8 315..370 CDD:290566 11/54 (20%)
leucine-rich repeat 315..335 CDD:275380 5/19 (26%)
leucine-rich repeat 338..360 CDD:275378 3/21 (14%)
gelsolin_S1_like 491..602 CDD:200446 29/161 (18%)
gelsolin_like 618..706 CDD:200436 27/109 (25%)
gelsolin_S3_like 729..828 CDD:200448 33/123 (27%)
gelsolin_like 920..1015 CDD:200436 21/105 (20%)
gelsolin_S5_like 1037..1141 CDD:200444 29/123 (24%)
gelsolin_S6_like 1151..1250 CDD:200447 32/132 (24%)
svilXP_012821108.1 CdhC <991..1076 CDD:299819 19/99 (19%)
gelsolin_S2_like 1551..1643 CDD:200445 24/93 (26%)
gelsolin_like 1672..1772 CDD:200436 27/110 (25%)
gelsolin_S4_like 1856..1968 CDD:200449 30/142 (21%)
gelsolin_S5_like 1990..2093 CDD:200444 29/130 (22%)
ADF_gelsolin 2110..2231 CDD:301701 31/130 (24%)
VHP 2288..2322 CDD:280388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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