DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tty and ttyh1

DIOPT Version :9

Sequence 1:NP_542443.4 Gene:tty / 33109 FlyBaseID:FBgn0015558 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_001072899.1 Gene:ttyh1 / 780361 XenbaseID:XB-GENE-940450 Length:536 Species:Xenopus tropicalis


Alignment Length:549 Identity:135/549 - (24%)
Similarity:251/549 - (45%) Gaps:51/549 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLHALPHYNITFHKINSTFRPNDEIYLESLGILGSVPAALLIVSLLGLLFYLMTRCC-------D 76
            :||.:||.|..|..:::.|.|.:..|.::|..|.|:....|.:||:.:..||:..||       |
 Frog    15 ILHQVPHTNFQFEVVDNQFAPQEWPYQQALLFLASIAGLCLAISLILICVYLIRFCCCSSQEDDD 79

  Fly    77 RKPRPAHSITSLKVALSIVTVMCCAAIGLGLYGNDDLHNGLLEVLTAGRKVDNLVTTIRNQTHIL 141
            .|   :|.:..:..:.....::|||.||:|.|||.:.::|:.:|..:....::.:|:|.......
 Frog    80 SK---SHRVCCVTWSCVAAVIICCAGIGIGFYGNSETNDGVYQVTYSLMNANHTLTSINLLISDT 141

  Fly   142 ENTLTNRIRPQLVELADIFDQPVSNQTALSKLFVSLNIVQGNVTLATNAASDIR-------RPLM 199
            ...|::.:|..|.:|.:||    |.:|   :..|.:...:..|.......::|.       .|..
 Frog   142 VELLSSVVRSDLTQLEEIF----SKRT---EFLVMIRNTRRQVESVAQQLAEISFWKGPEPNPNA 199

  Fly   200 GISMTHFLTRGDQWELIRWPGTVATLALLLVLCAVLLVGVARHSRCALILFSVCGLLAVTGSWLM 264
            .....:|:      |..||...:..|.|.|::|...|:|:|:..:..:|:.:|.....:..||..
 Frog   200 LAEQVNFI------EDYRWLAYILLLLLDLIICLFTLLGLAKQIKWLVIVMTVVSFFVLLLSWGS 258

  Fly   265 SGLYLSSSVAVGDLCISPADFLV--STAPRDLPTNVLLHYTQCEPGHTNPFTQRLRESQNSLNNA 327
            .||.::::|.:.|.|..|..:::  :.|..::..::|.:|..|....||||.|||..||.:|:|.
 Frog   259 MGLEMATAVGLSDFCSDPDAYVMNQTQAITNINPDILQYYISCNQDVTNPFRQRLTMSQRALSNI 323

  Fly   328 RSAMATVMKISLVLFKSSGLQPKLGAVNADLNSSERLLTQLTALVDCKAVHHNFLAAARGLCEGG 392
            .|.:..:.:.::..|.::  :..|..|...||::|.....|.||::|:.:|.:::.|.:|||..|
 Frog   324 HSQLHGLEREAVPQFPTA--EKNLLVVQGMLNTTEGNFHHLVALLNCRGLHKDYVDALKGLCYDG 386

  Fly   393 LLGLVLMLIASFIAAILLTIMVWVDSHTWIYIRKRN-DYAQVDEPSYISHPAPQNHQQMMNAART 456
            :.|::.:|:.||::|:..|..:......|...:.|: ||..:||....:   ||..::|::..  
 Frog   387 MEGILFLLLFSFLSALSFTAAICSLPRAWKRFQNRDLDYDDMDEDDPFN---PQARREMLHVT-- 446

  Fly   457 LPRNHNGHFSPPVISGSHTL-QHPSKRQQHEMMAHAHIQQNMR----AMGTHTLGRLP-SHNHSP 515
             .|.|    .|...|.|.:. .|.|.|.....:::|.:.|.|.    :.|......:| ....||
 Frog   447 -GRPH----LPSFYSYSSSCDSHSSLRVSAPPISNAPVSQYMNQSALSSGNPRFENIPLIDRQSP 506

  Fly   516 THMTGPNNAAAVAAAANAAANMPPTTQAA 544
            .....|:...:..:|.....:.|..|..|
 Frog   507 PPSYSPSMRTSFISATQEETDTPCRTDVA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttyNP_542443.4 Tweety_N 10..429 CDD:143653 108/426 (25%)
ttyh1NP_001072899.1 Tweety 26..421 CDD:368183 102/412 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I3775
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 186 1.000 Inparanoid score I3793
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D318605at33208
OrthoFinder 1 1.000 - - FOG0000987
OrthoInspector 1 1.000 - - mtm9568
Panther 1 1.100 - - LDO PTHR12424
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X806
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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