DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tty and ttyh3a

DIOPT Version :9

Sequence 1:NP_542443.4 Gene:tty / 33109 FlyBaseID:FBgn0015558 Length:970 Species:Drosophila melanogaster
Sequence 2:XP_009297972.1 Gene:ttyh3a / 556314 ZFINID:ZDB-GENE-120508-1 Length:527 Species:Danio rerio


Alignment Length:520 Identity:148/520 - (28%)
Similarity:245/520 - (47%) Gaps:54/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YKVPVIAKLLHALPHYNITFHKINSTFRPNDEIYLESLGILGSVPAALLIVSLLGLLFYLMTRCC 75
            |..|....|||.|||:|:.|.:.:|.|||.:..|.:||.:||.|..|.|.:.||.||.|....||
Zfish     7 YSPPWWVNLLHRLPHFNLQFEQTSSDFRPEESSYQQSLLLLGGVALACLALDLLFLLIYSCWLCC 71

  Fly    76 DRK---PRPAHSITSLKVALSIVTVMCCAAIGLGLYGNDDLHNGLLEVLT-----AGRKVDNLVT 132
            .||   .:|..........:.|.|::|.|.|.:|.|||.:..:|:.. ||     |.|.|..:..
Zfish    72 RRKKSDEQPNADCCCTAWCVIIATLVCSAGIAVGFYGNGETCDGVSR-LTYSLRHANRTVSGVHR 135

  Fly   133 TIRNQTHILENTLTNRIRPQLVELADIFDQPVSNQTALSKLFVSLNIVQGNVTLATNAASDIRRP 197
            .:...|.....|:...:|        |..:..:..|..      |:|:|    ...:..|::.|.
Zfish   136 LVSESTSAQSQTVDENLR--------ILKEQYAKHTDY------LSIIQ----KLQDQRSELVRQ 182

  Fly   198 L--------MGISMTHFLTRGDQWELIRWPGTVATLALLLVLCAVLLVGVARHSRCALILFSVCG 254
            :        :|:|:....|:.:.::..||.|.:..|...:::|.::|.|:.|:|:..||...:.|
Zfish   183 MADIPFWSNLGVSLEDLATQIELYDWYRWLGYLGLLLFDVLICLLVLFGLIRNSKGTLIGVCILG 247

  Fly   255 LLAVTGSWLMSGLYLSSSVAVGDLCISPADFL--VSTAPRDLPTNVLLHYTQCEPGHTNPFTQRL 317
            :||:..||...||.|:.|....|.|.:|..::  ||.....:..::|.:|..|:.|..|||.|:|
Zfish   248 VLALVISWSSLGLELTVSSGFSDFCAAPDMYITKVSEEYTIIKKDILPYYLTCDLGQANPFQQKL 312

  Fly   318 RESQNSLNNARSAMATVMKISLVLF-KSSGLQPKLGAVNADLNSSERLLTQLTALVDCKAVHHNF 381
            ..|..:|...:..::.:::.::..: |:.|   .|..:...||::|..|.||||||||:::|.::
Zfish   313 SGSHKALVEMQDDVSELLRSAVREYPKTKG---NLEQIQRGLNTTEAGLHQLTALVDCRSLHMDY 374

  Fly   382 LAAARGLCEGGLLGLVLMLIASFIAAILLTIMVWVDSHTWIYIRKRNDYAQVDEPSYISHPAPQN 446
            :.|..|:|..||.||:.:::.|||.|::.|.::....|||...|...|    .|...::....||
Zfish   375 VQALTGVCYDGLEGLIYLVLFSFITALMFTSVICSVPHTWHGKRPEED----SEEESVAPGGRQN 435

  Fly   447 HQQM----MNAARTLPRNHNGHFSPPVISGSHTLQHPSKRQQHEMMAHAHIQQNMRAMGTHTLGR 507
            |..:    |.:..:...::....|.|  :|:||:   |.....|.|......||.|...|..:||
Zfish   436 HDNLYRVHMPSLYSCGSSYGSETSIP--AGAHTV---SNAPVTEYMTQNANFQNPRCENTPLIGR 495

  Fly   508  507
            Zfish   496  495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttyNP_542443.4 Tweety_N 10..429 CDD:143653 128/436 (29%)
ttyh3aXP_009297972.1 Tweety 26..426 CDD:282726 121/425 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590164
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4433
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H18431
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D318605at33208
OrthoFinder 1 1.000 - - FOG0000987
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

Return to query results.
Submit another query.