DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tty and ttyh2

DIOPT Version :9

Sequence 1:NP_542443.4 Gene:tty / 33109 FlyBaseID:FBgn0015558 Length:970 Species:Drosophila melanogaster
Sequence 2:NP_989411.1 Gene:ttyh2 / 395050 XenbaseID:XB-GENE-854678 Length:534 Species:Xenopus tropicalis


Alignment Length:540 Identity:145/540 - (26%)
Similarity:240/540 - (44%) Gaps:67/540 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QYKVPVIAKLLHALPHYNITFHKINSTFRPNDEIYLESLGILGSVPAALLIVSLLGLLFYLMTRC 74
            :|..|.....||..||.:::..:.:..|.|.|..|.::|..:..:.|....|:||.:..||:..|
 Frog     7 EYIAPWWVYWLHNFPHVDLSLRQKSPDFNPKDPGYQQTLLFVALIVALCAAVNLLFVSVYLICLC 71

  Fly    75 CDRKPRPAHSITSLKVALSIVT-------VMCCAAIGLGLYGNDDLHNGLLEVLTAGRKVDNLVT 132
            |.:|   .....:.|.:...||       ::||||:|:|.|||.:.::|:.::..:   :||...
 Frog    72 CCKK---EDETETKKTSSCCVTWTAAVSGLLCCAAVGIGFYGNSETNDGVYQLTYS---LDNANH 130

  Fly   133 TIRNQTHILENT---LTNRIRPQLVELADIFDQPVSNQTALSKLFVSLNIVQ---GNVTLATNA- 190
            |:.....::.||   :...:...|..|.:||       .|......||..:|   ||:.....: 
 Frog   131 TLAGIDSLVSNTNFKMKEDLDKHLFRLNEIF-------AARGDYVQSLRFMQQMAGNIIQQLTSL 188

  Fly   191 ---------ASDIRRPLMGISMTHFLTRGDQWELIRWPGTVATLALLLVLCAVLLVGVARHSRCA 246
                     .|||.|....|            |..||...:......:|:|.|..||:|:.|:|.
 Frog   189 PNWQGTSVNLSDIARQTSTI------------EYYRWLSYLLLFISYVVICLVTCVGLAKKSKCL 241

  Fly   247 LILFSVCGLLAVTGSWLMSGLYLSSSVAVGDLCISPADFLVSTAPRDLPTNVLLHYTQCEPGHTN 311
            |::....||:|:..||....|..||::...|.|::|..|:::.....:.|.|:.:|..|.....|
 Frog   242 LLIMLCFGLIALMLSWTSLALETSSAMGTSDFCVAPDKFIMNMTHDQITTEVVHYYLYCSQSLRN 306

  Fly   312 PFTQRLRESQNSLNNARSAMATVMKISLVLFKSSGLQPKLGAVNADLNSSERLLTQLTALVDCKA 376
            ||.|.|...|.||...:..:..:::.::.||.::  |..|..:...||:||..|.|:|||:||:.
 Frog   307 PFQQALTVFQRSLTTMQIQVQGLLQFAVPLFPTA--QKDLLGIQLLLNTSESNLHQITALLDCRG 369

  Fly   377 VHHNFLAAARGLCEGGLLGLVLMLIASFIAAILLTIMVWVDSHTWIYIRKRN-DYAQVDEPSYIS 440
            :|.::|.|..|:|..|:.|::.:.:.|.:||:..|.||......|.::..|: ||..:|:..   
 Frog   370 LHKDYLEALIGICYDGVEGMLYLGLFSLLAALAFTAMVCAMPQAWKHLEARDRDYNDIDDED--- 431

  Fly   441 HPAPQNHQQMMNAARTLPRNHNGHF-SPPVISGSH-TLQHPSKRQQHEMMAHAHIQQ------NM 497
               |.|.|....||....|.....| |.....||. :||.|:....:..:|. ::.|      |.
 Frog   432 ---PFNPQARRIAAHNPNRGQLRSFCSYSSSMGSQASLQPPAPTVSNAPVAE-YMNQAALFGGNP 492

  Fly   498 RAMGTHTLGR-LPSHNHSPT 516
            |......:|| .|...:|||
 Frog   493 RYENVPLIGRGSPPPTYSPT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttyNP_542443.4 Tweety_N 10..429 CDD:143653 119/442 (27%)
ttyh2NP_989411.1 Tweety 27..433 CDD:309852 116/438 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I3775
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 186 1.000 Inparanoid score I3793
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D318605at33208
OrthoFinder 1 1.000 - - FOG0000987
OrthoInspector 1 1.000 - - mtm9568
Panther 1 1.100 - - O PTHR12424
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7666
SonicParanoid 1 1.000 - - X806
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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