DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1486 and Hdc

DIOPT Version :9

Sequence 1:NP_608450.1 Gene:CG1486 / 33108 FlyBaseID:FBgn0031174 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001260855.1 Gene:Hdc / 36076 FlyBaseID:FBgn0005619 Length:847 Species:Drosophila melanogaster


Alignment Length:943 Identity:188/943 - (19%)
Similarity:303/943 - (32%) Gaps:298/943 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LENVK-------VS------TTPESPNPVENEE-----EAGERVTSEDL-----------LPAKH 91
            |||::       ||      ..|||. |:|.|.     ...||:....:           .||.:
  Fly    21 LENIRERRVFPDVSPGYMRQLLPESA-PIEGEPWPKIFSDVERIVMPGITHWQSPHMHAYFPALN 84

  Fly    92 RVPS---DILKSLEQLVSYTDSDDDPEFPLPALDDVSHLALISHSIVAYLSHLDRQQLLRVTNSI 153
            .:||   |:|......:.:|.:..      ||..::..:.:                        
  Fly    85 SMPSLLGDMLADAINCLGFTWASS------PACTELEIIVM------------------------ 119

  Fly   154 SGDATRWLGTLF----HFAHPASSFHADNADAVLRTVRLAIVARC----------------PGYL 198
                 .|||.:.    .|.|.:|.   .....||:|........|                |||.
  Fly   120 -----NWLGKMIGLPDAFLHLSSQ---SQGGGVLQTTASEATLVCLLAGRTRAIQRFHERHPGYQ 176

  Fly   199 EGGIPALAQPTFYISENTTPMRLHYACRQLG-IPLEAIKVIPEHSQSGTMDVTLLQKQIQQDVGN 262
            :..|.  |:...|.|:     :.|.:..:.. |.|..::.| |......|...||::.|:.|:..
  Fly   177 DAEIN--ARLVAYCSD-----QAHSSVEKAALIGLVRMRYI-EADDDLAMRGKLLREAIEDDIKQ 233

  Fly   263 NRTPLLVVADIGAS-LCGYVDNLLRLRDVCKAHNMWLHA-SGHGLAALVCAQNQGHVE--EVLHS 323
            ...|..|.|.:|.: .|.: |||..:..||..|::|||. :.:..:|.:|.:.:..:.  |...|
  Fly   234 GLVPFWVCATLGTTGSCSF-DNLEEIGIVCAEHHLWLHVDAAYAGSAFICPEFRTWLRGIERADS 297

  Fly   324 MALNLGSWLGV----PSL---------------PIVLLHRPLQNSALSA-FESDPI-LSRRLNAL 367
            :|.|...||.|    .:|               |:.|.|   :||.::. |....| ||||..||
  Fly   298 IAFNPSKWLMVHFDATALWVRDSTAVHRTFNVEPLYLQH---ENSGVAVDFMHWQIPLSRRFRAL 359

  Fly   368 SLWTSLQALGRKAIAE------RLHVAFQTCSIL---FEIASK---------CEG--------IR 406
            .:|..|::.|.|.:..      ||...|:...:.   ||:.:|         ..|        ::
  Fly   360 KVWFVLRSYGIKGLQRHIREGVRLAQKFEALVLADHRFELPAKRHLGLVVFRIRGDNEITEKLLK 424

  Fly   407 VLSH------TPGA------------QTGASLSDVIQSPFDVQALFDAAAPVVAYQFDGSTTIPL 453
            .|:|      .|.:            .|..:|.|:::...:::   ..|:.|:.   :.:.||  
  Fly   425 RLNHRGNLHCIPSSLKGQYVIRFTITSTHTTLDDIVKDWMEIR---QVASTVLE---EMNITI-- 481

  Fly   454 GGSGSSAAAAAAERETAEG---------LKPLEKINNASYFDRLNSWLGQILQRDCPNFDFEVIE 509
              |.........|:..|.|         |.|  |:.|.|:               ...||.:...
  Fly   482 --SNRVYLKETKEKNEAFGSSLLLSNSPLSP--KVVNGSF---------------AAIFDADEFL 527

  Fly   510 HPTHGSCIRYCPLELGLGEQPPSSENLESFAQ-----SLEAHVDILRATIKHKARFIHLVECSDV 569
            ..|      |..:.:...|.|.....:.....     ||::|:|::..|...             
  Fly   528 AKT------YAGVRIAHQESPSMRRRVRGILMSGKQFSLDSHMDVVVQTTLD------------- 573

  Fly   570 LRLVPLPEWAGMGGVRFVPEGWESLLTDQAKTELNKLNIDLVEALKSTDNAFSLGEGTDGLICVR 634
                     ||.|..|              .:..|........|..:::...|:.|..:      
  Fly   574 ---------AGNGATR--------------TSTTNSYGHTTSAAQANSERQASIQEDNE------ 609

  Fly   635 FGMVTHETEVEELLDLVVTVGKSVQENSRVLDTMSEIVKKG----IEAVTADLQRESEEKLWQEG 695
                 ...|..|||.|..|......|::..|.|.|......    |.::|....|.|....::..
  Fly   610 -----ESPEETELLSLCRTSNVPSPEHAHSLSTPSRSCSSSSHSLIHSLTQSSPRSSPVNQFRPI 669

  Fly   696 ILRHVPVVGRVFNWWSPPAKESGIKGRSLNLTQGVVESTENIY--KYHMQMTGATAHQLPANRSP 758
            .|..||...::....:.|.....:.....:|...|  :|.|:|  |..::.....| |..|:.|.
  Fly   670 TLCAVPSQSQLSMPLAMPLPNRNVTVSVDSLLNPV--TTCNVYHGKRFLEPLENLA-QTSASFSS 731

  Fly   759 -----PTPMVQTPVVAPALPPVFPT-------VEPVPGNGNGSGASEGTPVQSGEASGSMPAASG 811
                 ||| :.||.......|.:|.       :|.........|.:..|  :|...||      |
  Fly   732 SIFRLPTP-IATPTRESPEDPDWPAKTFSQLLLERYSSQSQSLGNNSST--ESSSLSG------G 787

  Fly   812 AAPSAAPTQNHVDHARTVSQSSAASSTVPELVA 844
            |.|:..| .:.:|...|....|.||.:.|.|.|
  Fly   788 ATPTPTP-MSSLDELVTPLLLSFASPSQPMLSA 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1486NP_608450.1 AAT_I 159..>384 CDD:302748 68/276 (25%)
WWbp <725..801 CDD:304964 21/89 (24%)
HdcNP_001260855.1 Pyridoxal_deC 35..413 CDD:278699 91/428 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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