Protein Alignment Dd and TIM50

DIOPT Version :10

• Sequence 1: NP_608449.1
• Gene: Dd / 33107
• FlyBaseID: FBgn0029067
• Length: 243
• Species: Drosophila melanogaster
• Sequence 2: NP_175986.2
• Gene: TIM50 / 842040
• AraportID: AT1G55900
• Length: 376
• Species: Arabidopsis thaliana
• Alignment Length: 209
• Identity: 64/209 - (30%)
• Similarity: 102/209 - (48%)
• Gaps: 37/209 - (17%)

  Fly    30 QVRAFIQYQPVKYELFP-LSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFT 93
            ||:.|.  :|:..:|.| |.|..:|..      ||||||:|||:::....
plant   167 QVKGFT--EPLSEKLLPDLHPAEQHVF------TLVLDLNETLLYTDWKR--------------- 208

  Fly    94 VKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLD-NGRNILRRRYYR 157
                 :|....|   |||.||.||:.:.::|::||::..||:|...|.:||| ||  .:|.:..|
plant   209 -----ERGWRTF---KRPGVDAFLEHLGKFYEIVVYSDQMEMYVLPVCEKLDPNG--YIRYKLAR 263

  Fly   158 QHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPMLD- 221
            .....:.|.:.:|||.:..|..:|..:..:.......|.|::|||.:..:..||||:.|:|.|:
plant   264 GATKYENGKHYRDLSKLNRDPKKILFVSANAFESTLQPENSVPIKPYKLEADDTALVDLIPFLEY 328

  Fly   222 -ALRFTNDVRSVLS 234
             |.....|:|.||:
plant   329 VARNSPADIRPVLA 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Dd	NP_608449.1	HIF-SF_euk	60..228	CDD:274055	51/170 (30%)
TIM50	NP_175986.2	NIF	191..338	CDD:397254	52/177 (29%)