DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dd and AT1G43600

DIOPT Version :10

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_175025.1 Gene:AT1G43600 / 840944 AraportID:AT1G43600 Length:221 Species:Arabidopsis thaliana


Alignment Length:206 Identity:42/206 - (20%)
Similarity:79/206 - (38%) Gaps:35/206 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LVQRKT-----LVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPV--------RFFVH 108
            |.|:|.     ||||||.||:||   .:..:..|   ...:.::.|..|..:        .|.:.
plant    10 LFQKKKKKKLHLVLDLDHTLLHS---VLVSDLSK---REKYLLEETDSRQDLWRRNVDGYEFIIK 68

  Fly   109 KRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSA 173
            .||.:..||...::.:.:.|:|.....|...|...:|..:....:|...:..:|    :.|.|..
plant    69 LRPFLHEFLLEANKLFTMHVYTMGSSSYAKQVLKLIDPDKVYFGKRVITREASP----FNKSLDL 129

  Fly   174 ICSDLNRIFIIDNSPGAYRCFPNNAIPIKSW------------FSDPMDTALLSLLPMLDALRFT 226
            :.:|..|:.|:|::...:.....|.:.|..:            :::.......|...:.:.|:|.
plant   130 LAADKRRVVIVDDTVHVWPFHKRNLLQITKYVYFKVDGTKWDSYAEAKKDESQSNGSLANVLKFL 194

  Fly   227 NDVRSVLSRNL 237
            .||......:|
plant   195 EDVHKRFEEDL 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 37/192 (19%)
AT1G43600NP_175025.1 Haloacid Dehalogenase-like Hydrolases 19..163 CDD:473868 33/153 (22%)

Return to query results.
Submit another query.