DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and ctdspl3

DIOPT Version :9

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:XP_021335375.1 Gene:ctdspl3 / 571337 ZFINID:ZDB-GENE-141215-56 Length:360 Species:Danio rerio


Alignment Length:182 Identity:64/182 - (35%)
Similarity:97/182 - (53%) Gaps:9/182 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDL 126
            ||||||||||:.|..|.:|        ..::|.......:..:.:|..||||..||..:::.:::
Zfish   183 TLVLDLDETLVFSSLNVIP--------DAEYTFNTRFQDHKYKVYVILRPHVREFLQAMTKHFEM 239

  Fly   127 VVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAY 191
            .|:|::.:.|...:.|.||..:.:.|.|.|:..|....|.|.|||:.:..||::..|:||:|..:
Zfish   240 FVYTSAKKEYAEKIVDILDPNKKLFRHRLYQDDCACVLGHYIKDLTILERDLSKTVILDNAPHTF 304

  Fly   192 RCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVL-SRNLHLHRL 242
            .....|.||||||..|..|..|..|:|.::.|...:|.|:|| .|..|.|||
Zfish   305 PYHLMNMIPIKSWIGDQEDRELQKLIPYMEKLVHADDFRNVLKKRTDHFHRL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 55/165 (33%)
ctdspl3XP_021335375.1 Atrophin-1 <19..182 CDD:331285
NIF 183..343 CDD:308590 56/167 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176152at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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