DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and ctdspl2a

DIOPT Version :10

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001071012.1 Gene:ctdspl2a / 558181 ZFINID:ZDB-GENE-061013-647 Length:469 Species:Danio rerio


Alignment Length:219 Identity:75/219 - (34%)
Similarity:110/219 - (50%) Gaps:15/219 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FMFNRQVRAFIQYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTP 89
            :.|.:.|....:.|..:....||...|....|      |||||||||:|...|.:....:     
Zfish   261 YFFIKHVPPLTEEQLTRKPALPLKTRSTPEFS------LVLDLDETLVHCSLNELEDAAL----- 314

  Fly    90 HDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRR 154
               |..|.......:.:|..||....||:.:||.|::::||||.::|...:.:.||..:.::|.|
Zfish   315 ---TFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHR 376

  Fly   155 YYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPM 219
            .:|:||....|:|.|||:.:..||::..||||||.|:....:|.|||:|||.|..|..||.|:|.
Zfish   377 LFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFVDKNDNELLKLVPF 441

  Fly   220 LDAL-RFTNDVRSVLSRNLHLHRL 242
            |:.| ....|||..:.....||.|
Zfish   442 LEKLVELNEDVRPYIRERFRLHDL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 62/168 (37%)
ctdspl2aNP_001071012.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..136
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..209
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..250
HIF-SF_euk 290..445 CDD:274055 62/168 (37%)
Blue background indicates that the domain is not in the aligned region.

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