DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and ctdnep1

DIOPT Version :10

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001017177.1 Gene:ctdnep1 / 549931 XenbaseID:XB-GENE-5939296 Length:244 Species:Xenopus tropicalis


Alignment Length:234 Identity:167/234 - (71%)
Similarity:198/234 - (84%) Gaps:0/234 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RALLLLLSKVWTCICFMFNRQVRAFIQYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHS 74
            |..:...:|:|:.:.::..||||..||||.|:|::.||||.||:|||.|:||.||||||||||||
 Frog    11 RGFVAFAAKLWSFVLYLLRRQVRTIIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDETLIHS 75

  Fly    75 HHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAA 139
            ||:.:.|.||:||||.||.:||.||::|||||||||||||:||:||||||:||||||||||||:|
 Frog    76 HHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 140

  Fly   140 VADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSW 204
            |||||||.|.:||||:||||||.:.|||.||||.:.|||:.:.|:||||||||..|:||||||||
 Frog   141 VADKLDNNRGVLRRRFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSW 205

  Fly   205 FSDPMDTALLSLLPMLDALRFTNDVRSVLSRNLHLHRLW 243
            ||||.|||||:|||||||||||.|||||||||||.||||
 Frog   206 FSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 129/167 (77%)
ctdnep1NP_001017177.1 HIF-SF_euk 61..229 CDD:274055 129/167 (77%)

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