DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and Ctdsp2

DIOPT Version :9

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001106941.1 Gene:Ctdsp2 / 52468 MGIID:1098748 Length:270 Species:Mus musculus


Alignment Length:176 Identity:72/176 - (40%)
Similarity:103/176 - (58%) Gaps:9/176 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWY 124
            |..:|:||||||:||        :.||....||.|.|.|:....:.:|.|||:||.||..:.:.:
Mouse   100 RICVVIDLDETLVHS--------SFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELF 156

  Fly   125 DLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPG 189
            :.|:||||:..|...|.|.||. ..:.|.|.:|:.|....|.|.||||.:..||.:..|:||||.
Mouse   157 ECVLFTASLAKYADPVTDLLDR-CGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPA 220

  Fly   190 AYRCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVLSR 235
            :|...|.||:|::|||.|..||.||:|:|:.:.|..|:||.:.|.:
Mouse   221 SYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGTDDVYTSLGQ 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 69/167 (41%)
Ctdsp2NP_001106941.1 HIF-SF_euk 100..259 CDD:274055 69/167 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176152at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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