DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and ctdnep1b

DIOPT Version :9

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001007441.2 Gene:ctdnep1b / 492799 ZFINID:ZDB-GENE-041114-152 Length:248 Species:Danio rerio


Alignment Length:248 Identity:165/248 - (66%)
Similarity:202/248 - (81%) Gaps:5/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MISLLQMK-----FRALLLLLSKVWTCICFMFNRQVRAFIQYQPVKYELFPLSPVSRHRLSLVQR 60
            |:.:|:.:     .|..|.:.|::|:...::..:.:|..||||.|:|::..|||:||:||:.|:|
Zfish     1 MVDMLKTRQCLLGVRTFLGVTSRIWSFFLYILRKHIRTIIQYQTVRYDVLSLSPISRNRLNNVKR 65

  Fly    61 KTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYD 125
            |.||||||||||||||:.:.|.||:||||.||.:||.||::|||||||||||||:||:||||||:
Zfish    66 KILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYE 130

  Fly   126 LVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGA 190
            ||||||||||||:||||||||.:.||:|||||||||.|.|||.||||.:..||:.:.|:||||||
Zfish   131 LVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCTLDSGSYIKDLSVVHDDLSSVVILDNSPGA 195

  Fly   191 YRCFPNNAIPIKSWFSDPMDTALLSLLPMLDALRFTNDVRSVLSRNLHLHRLW 243
            ||..|:||||||||||||.|||||:|||||||||||.|||||||||||.||||
Zfish   196 YRSHPDNAIPIKSWFSDPSDTALLNLLPMLDALRFTADVRSVLSRNLHQHRLW 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 129/167 (77%)
ctdnep1bNP_001007441.2 HIF-SF_euk 65..233 CDD:274055 129/167 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594607
Domainoid 1 1.000 280 1.000 Domainoid score I1647
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9100
Inparanoid 1 1.050 354 1.000 Inparanoid score I2214
OMA 1 1.010 - - QHG54256
OrthoDB 1 1.010 - - D468474at33208
OrthoFinder 1 1.000 - - FOG0002783
OrthoInspector 1 1.000 - - otm24907
orthoMCL 1 0.900 - - OOG6_105071
Panther 1 1.100 - - LDO PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2457
SonicParanoid 1 1.000 - - X1870
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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