DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dd and ctdnep1a

DIOPT Version :9

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001007310.1 Gene:ctdnep1a / 492343 ZFINID:ZDB-GENE-041114-177 Length:245 Species:Danio rerio


Alignment Length:234 Identity:167/234 - (71%)
Similarity:199/234 - (85%) Gaps:0/234 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RALLLLLSKVWTCICFMFNRQVRAFIQYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHS 74
            |..|.:.|::|:...::..:.:|..||||.|:|::.||||:||:||:.|:||.||||||||||||
Zfish    12 RTFLGVTSRIWSFFLYILRKHLRTIIQYQTVRYDILPLSPISRNRLNAVKRKILVLDLDETLIHS 76

  Fly    75 HHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAA 139
            ||:.:.|.||:||||.||.:||.||::|||||||||||||:||:||||||:||||||||||||:|
Zfish    77 HHDGVLRPTVRPGTPPDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSA 141

  Fly   140 VADKLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSW 204
            |||||||.|.||:|||||||||.|.|||.||||.:.|||:.|.|:||||||||..|:||||||||
Zfish   142 VADKLDNNRGILKRRYYRQHCTLDLGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSW 206

  Fly   205 FSDPMDTALLSLLPMLDALRFTNDVRSVLSRNLHLHRLW 243
            ||||.|||||:|||||||||||:|||||||||||.||||
Zfish   207 FSDPSDTALLNLLPMLDALRFTSDVRSVLSRNLHQHRLW 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 132/167 (79%)
ctdnep1aNP_001007310.1 HIF-SF_euk 62..230 CDD:274055 132/167 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594606
Domainoid 1 1.000 280 1.000 Domainoid score I1647
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9100
Inparanoid 1 1.050 354 1.000 Inparanoid score I2214
OMA 1 1.010 - - QHG54256
OrthoDB 1 1.010 - - D1176152at2759
OrthoFinder 1 1.000 - - FOG0002783
OrthoInspector 1 1.000 - - otm24907
orthoMCL 1 0.900 - - OOG6_105071
Panther 1 1.100 - - O PTHR12210
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2457
SonicParanoid 1 1.000 - - X1870
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.