DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and Ublcp1

DIOPT Version :10

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001014139.1 Gene:Ublcp1 / 360514 RGDID:1310386 Length:318 Species:Rattus norvegicus


Alignment Length:218 Identity:44/218 - (20%)
Similarity:74/218 - (33%) Gaps:80/218 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWY 124
            :|.||||:|.||.  .|.:.....|:                      ..||::..||....:.|
  Rat   137 KKLLVLDVDYTLF--DHRSCAETGVE----------------------LMRPYLHEFLTSAYEDY 177

  Fly   125 DLVVFTAS--------MEIYGAA------VADKLDNGRNILRRRYYRQHCTPDYG---------- 165
            |:|:::|:        |:..|.:      :...||:...|...       ||..|          
  Rat   178 DIVIWSATNMKWIEAKMKELGVSTNANYKITFMLDSAAMITVH-------TPRRGLIDVKPLGVI 235

  Fly   166 ------SYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPI----KSWFSDPMDTALLSLLPML 220
                  .|:|..:.:..|:.|.|:::         |.|.:.|    |:..:...|..|:.|...|
  Rat   236 WGKFSEFYSKKNTIMFDDIGRNFLMN---------PQNGLKIRPFMKAHLNRDKDKELVKLTQYL 291

  Fly   221 DALRFTNDVRSVLSRNLHLHRLW 243
            ..:...:|   .|..|   |:.|
  Rat   292 KEIAKLDD---FLELN---HKYW 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 39/201 (19%)
Ublcp1NP_001014139.1 Ubl_UBLCP1 3..77 CDD:340511
HAD_IIID1 117..311 CDD:131299 44/218 (20%)
Blue background indicates that the domain is not in the aligned region.

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