DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dd and ctdspl2b

DIOPT Version :9

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001082795.1 Gene:ctdspl2b / 323089 ZFINID:ZDB-GENE-030131-1809 Length:460 Species:Danio rerio


Alignment Length:219 Identity:75/219 - (34%)
Similarity:111/219 - (50%) Gaps:15/219 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FMFNRQVRAFIQYQPVKYELFPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTP 89
            :.|.:.|....:.|..:....||...|....|      |||||||||:|...|.:....:     
Zfish   252 YFFIKHVPPLTEEQLTRKPALPLKTRSTPEFS------LVLDLDETLVHCSLNELDDAAL----- 305

  Fly    90 HDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRR 154
               |..|.......:.:|..||....||:.:||.|::::||||.::|...:.:.||..:.::|.|
Zfish   306 ---TFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHR 367

  Fly   155 YYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPM 219
            .:|:||....|:|.|||:.:..||::..||||||.|:....:|.|||:|||.|..|:.||.|:|.
Zfish   368 LFREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDSELLKLVPF 432

  Fly   220 LDAL-RFTNDVRSVLSRNLHLHRL 242
            |:.| ....|||..:.....||.|
Zfish   433 LEKLVELNEDVRPHVRERFRLHDL 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 62/168 (37%)
ctdspl2bNP_001082795.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..231
HIF-SF_euk 281..436 CDD:274055 62/168 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176152at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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