DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dd and cnep-1

DIOPT Version :10

Sequence 1:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster
Sequence 2:NP_001254123.1 Gene:cnep-1 / 185802 WormBaseID:WBGene00018474 Length:276 Species:Caenorhabditis elegans


Alignment Length:225 Identity:152/225 - (67%)
Similarity:180/225 - (80%) Gaps:11/225 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CFM----------FNRQVRAFIQYQPVKYEL-FPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHN 77
            ||:          |.:..||:.:||.|||.. .|:||::.|||..|:||.||||||||||||||:
 Worm    40 CFLAGFFNFFLLYFRKTSRAYCKYQVVKYHSNIPMSPLTTHRLLTVKRKILVLDLDETLIHSHHD 104

  Fly    78 AMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVAD 142
            .:.|.|||||||.|||::|.|||:||:|.||:||||||||.||||||:|||||||||:||.:|||
 Worm   105 GVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVAD 169

  Fly   143 KLDNGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSD 207
            :||.||.||:|||:|||||.:.|.||||||||..||:.|.|:||||||||.||:|||||.|||||
 Worm   170 RLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIPSWFSD 234

  Fly   208 PMDTALLSLLPMLDALRFTNDVRSVLSRNL 237
            |.||.||:|||.|||||||:|||||||||:
 Worm   235 PNDTCLLNLLPFLDALRFTSDVRSVLSRNM 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 126/167 (75%)
cnep-1NP_001254123.1 HIF-SF_euk 87..255 CDD:274055 126/167 (75%)

Return to query results.
Submit another query.