DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and YDR109C

DIOPT Version :9

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_010394.3 Gene:YDR109C / 851687 SGDID:S000002516 Length:715 Species:Saccharomyces cerevisiae


Alignment Length:238 Identity:44/238 - (18%)
Similarity:96/238 - (40%) Gaps:65/238 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 YVGEVVKPM-DKKKVLVKVHPEGKFVVDLDKNI-----------DINDVTPNCRVALRNESYTLH 123
            |:.::::.: :|:||        :.|:.|.|::           .|.|  ||.|..:..:|    
Yeast   415 YLNKILETLVEKRKV--------RSVISLAKHLFFYGDYHGNRSPIAD--PNMRACIIGQS---- 465

  Fly   124 KILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 188
              :.|.::.|..:.:      |..|.:.      ::.:::||:.:|.....:|:.::..:     
Yeast   466 --MDNSIEDLAVMYL------SACEFIS------QQTRQIIEVMLKSGHEINAIFMSGGQ----- 511

  Fly   189 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMV----RELFVMAREHAPSIIFMDE 249
                ...:||.|.:|   :||.:.:.....|...:..||.::    .|.|...||..       .
Yeast   512 ----CRNSLLMRLLA---DCTGLPIVIPRYVDAAVVFGSALLGAAASEDFDYTREKR-------T 562

  Fly   250 IDSIGSSRIESGSGGD--SEVQRTMLELLNQLDGFEATKNIKV 290
            :....||:.::....|  |.:|:..:|..|..:||.:..|:::
Yeast   563 LKGQKSSQTKTERFNDSYSSIQKLSMEDRNSTNGFVSPHNLQL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 44/238 (18%)
SlyX <27..>69 CDD:294687
AAA_16 152..>205 CDD:289934 8/52 (15%)
AAA 185..317 CDD:278434 23/112 (21%)
YDR109CNP_010394.3 FGGY_YpCarbK_like 38..703 CDD:212663 44/238 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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