Protein Alignment Rpt6 and RPT1A

DIOPT Version :9

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_175778.1
• Gene: RPT1A / 841812
• AraportID: AT1G53750
• Length: 426
• Species: Arabidopsis thaliana
• Alignment Length: 385
• Identity: 192/385 - (49%)
• Similarity: 258/385 - (67%)
• Gaps: 12/385 - (3%)

  Fly    16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRN--------ELNAKVRMLREELQLLQEQGSYV 72
            |.|..|..|:|:|:....:|:|..:|..::....        :|.:..:|::||..|   |.:..
plant    30 GLGPYSAPIKKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPL---QVARC 91

  Fly    73 GEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSL 136
            .:::.| .:..|.::.|....||||.|...:...|:....||.:....|.:...||.|:||.|::
plant    92 TKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156

  Fly   137 MMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 201
            |.||:.||.||..|||..:||::::||:|||:.|||.|..|||..|||||.||||||||||||||
plant   157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARA 221

  Fly   202 VAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 266
            ||:.|:..||||.|||||||::|||:|||||||.|||.....|:|.||:|:||.:|.:.|.|||:
plant   222 VANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286

  Fly   267 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIH 331
            ||||||||::||||||:|..||||:|||||.|.||||||||||:|||:||..|:.|:|..|.|||
plant   287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351

  Fly   332 SRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQ 391
            :|.||..|.|....:|.|.|.::||:::.|||||||||:|.||..||::||..||.||::
plant   352 TRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	RPT1	17..403	CDD:224143	191/384 (50%)
		SlyX	<27..>69	CDD:294687	9/49 (18%)
		AAA_16	152..>205	CDD:289934	36/52 (69%)
		AAA	185..317	CDD:278434	94/131 (72%)
RPT1A	NP_175778.1	RPT1	26..423	CDD:224143	192/385 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D571919at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820