DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and katna1

DIOPT Version :9

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001072433.1 Gene:katna1 / 779887 XenbaseID:XB-GENE-995720 Length:492 Species:Xenopus tropicalis


Alignment Length:419 Identity:134/419 - (31%)
Similarity:205/419 - (48%) Gaps:85/419 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QKIEELQLVVAEKHQNL------RRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKK 83
            :|.:.:|....:.|.|.      ..|.:.:|..|.|::.:|..                  :||.
 Frog   113 RKRQSVQCNDNKSHNNRFGAGKGPNLPSSKNTNNVKMKPVRAR------------------EKKD 159

  Fly    84 VLVKVHPE-GKFVVDLD----KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVP 143
            ..:||..| .|..||:.    |..|......:...||..:                   ::.:.|
 Frog   160 TFLKVKDEKNKSSVDVSETEVKKFDGTGYDKDLIEALERD-------------------IISQNP 205

  Fly   144 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHHTE 207
            :..::.:..|::..|.:||.:.||:..||.|.  ||.:| ||||:.|||||||||||:|||  ||
 Frog   206 NIRWDDIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAKAVA--TE 266

  Fly   208 C--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEV-Q 269
            |  ||..:|.|.|..|:.||..::||.||.|||.:||:.||:||||||.|.|   |:..:.|. :
 Frog   267 CKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSEEHEASR 328

  Fly   270 RTMLELLNQLDGF-------EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDI 327
            |...|||.|:||.       :.:|.:.|:.|||....:|.||.|  |::::|..|.|:.:.|.::
 Frog   329 RVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREEL 391

  Fly   328 LKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER-----------------RV 375
            |:|:.:::.|...:|:..|||.|.|.|||::..||.:|.:.|:|.|                 .:
 Frog   392 LRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHM 456

  Fly   376 HVTQEDFEMAVAKVMQKDSEKNMSIKKLW 404
            ..|.||||||:.||.:..|..::...:.|
 Frog   457 PTTMEDFEMALKKVSKSVSASDIEKYEKW 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 133/416 (32%)
SlyX <27..>69 CDD:294687 8/47 (17%)
AAA_16 152..>205 CDD:289934 30/53 (57%)
AAA 185..317 CDD:278434 66/141 (47%)
katna1NP_001072433.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..158 9/62 (15%)
SpoVK <190..487 CDD:223540 115/324 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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