DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and Katnal2

DIOPT Version :9

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001355584.1 Gene:Katnal2 / 71206 MGIID:1924234 Length:539 Species:Mus musculus


Alignment Length:492 Identity:139/492 - (28%)
Similarity:230/492 - (46%) Gaps:109/492 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VTNRMEIESAYHKGEGFRSYYIQKIEELQLVVA-----------------------EKHQNLRRL 44
            |.:.:::|:...:   :.|||..|.::...||.                       :..|||.::
Mouse    62 VCDNVDLETILME---YESYYFVKFQKYPKVVKKAPDPVENNLPSRSGGKNKRLTNDSCQNLPKI 123

  Fly    45 --QAQRNELNA----KVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVH---PEGKFVVDLDK 100
              |..|.:.:|    ..:.::|.|:.::|  |......:..|....:.|:|   ||.|......:
Mouse   124 CHQKSRPKTSAVKTGDTKSVKEHLKQVKE--SVTDTQAESTDFGLNISKIHKDQPEEKAQPRRGQ 186

  Fly   101 NIDINDVTPNCRVALRNESYTLHKILPNKVDP-----------------------LVSLMMVEKV 142
            .||...:..:......:| :.|:....|. ||                       :||..:....
Mouse   187 IIDFRGLLSDAIKGATSE-FALNTFECNP-DPSERLLKPLSAFIGMNSEMRELAAVVSRDIYLHN 249

  Fly   143 PDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARAVAHHT 206
            |:..:..:.|||...:.:||.:..|:::|:||  .||..| ||:||||||||||||||:|||  |
Mouse   250 PNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLF--TGILSPWKGLLLYGPPGTGKTLLAKAVA--T 310

  Fly   207 EC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESG--SGGDSE 267
            ||  ||..:|.|.:|.|:.|:..::||.||.:||.||||.||:||::|:.|.|   |  .||:.|
Mouse   311 ECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR---GMVPGGEHE 372

  Fly   268 VQ-RTMLELLNQLDGFEATKNIKVIMATNRID-ILDPALLRPGRIDRKIEFPPPNEEARLDIL-- 328
            .. |...|||.|:||...::::..::|.:.:. .||.|:||  |::::|....|::|||..::  
Mouse   373 GSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSQEARQAMIYH 435

  Fly   329 ------KIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE--------------- 372
                  |.|:  :.|...:....:::...|.||:::|.||.||.|..:|:               
Mouse   436 WLPPVSKNHA--LELHTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFSVLENNQSESNNL 498

  Fly   373 ---RRVHVTQEDFEMAVAKVMQKDSEKNMSIKKL-WK 405
               :...||.:||...:|..  |.|.||::.:.| |:
Mouse   499 PGIQLDTVTTQDFLDVLAHT--KPSAKNLTERYLAWQ 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 135/473 (29%)
SlyX <27..>69 CDD:294687 11/70 (16%)
AAA_16 152..>205 CDD:289934 31/53 (58%)
AAA 185..317 CDD:278434 63/137 (46%)
Katnal2NP_001355584.1 LisH 25..55 CDD:128913
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..121 2/27 (7%)
SpoVK <239..523 CDD:223540 104/296 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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