Protein Alignment Rpt6 and Atad2

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_081711.2
• Gene: Atad2 / 70472
• MGIID: 1917722
• Length: 1364
• Species: Mus musculus
• Alignment Length: 315
• Identity: 114/315 - (36%)
• Similarity: 172/315 - (54%)
• Gaps: 47/315 - (14%)

  Fly   116 RNESYTLHKILP-------------NKVDPLVSLMMVEKVPDST---YEMVGGLDKQIKEIKEVI 164
            ||.:..:::.||             :::....||..|:.:...|   ::.||||...|..:||::
Mouse   357 RNRNRAINRCLPLNFRKDEIRGIYKDRMKIGASLADVDPMQLDTSVRFDSVGGLSSHIAALKEMV 421

  Fly   165 ELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECT-------FIRVSGSELVQKF 222
            ..|:.:||:|:...|..|:|.|.||||||||||:|||:|:  ||:       |....|::.:.|:
Mouse   422 VFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN--ECSRGDKRVAFFMRKGADCLSKW 484

  Fly   223 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKN 287
            :||..|.:|.||..|.:..|:|||.||||.:...|........|.:..|:|.|   :||.::...
Mouse   485 VGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLAL---MDGLDSRGE 546

  Fly   288 IKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN--LRKIAELM 350
            |.||.||||:|.:||||.||||.||:..|..|::.||.:|||||:|..| .:.::  |.::||..
Mouse   547 IVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILKIHTRDWN-PKPVDMFLEELAEHC 610

  Fly   351 PGASGAEVKGVCTEAGMYALRER--RVHVTQE--------------DFEMAVAKV 389
            .|..||::|.:|.||.:.|||.|  :::.|.|              |||.|:.|:
Mouse   611 VGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLDLSSITISAKDFEAALQKI 665

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	114/315 (36%)
Atad2	NP_081711.2	RecA-like_Yta7-like	406..575	CDD:410925	74/173 (43%)
		AAA_lid_3	603..637	CDD:465537	14/33 (42%)
		ycf46	<766..907	CDD:177094
		Bromo_AAA	960..1070	CDD:99957