DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt6 and PSMC5

DIOPT Version :9

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_024306608.1 Gene:PSMC5 / 5705 HGNCID:9552 Length:433 Species:Homo sapiens


Alignment Length:427 Identity:372/427 - (87%)
Similarity:386/427 - (90%) Gaps:28/427 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RMEIESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGS 70
            :||:|.. ..|.|.|.||:.|||||||:|.:|.||||||||||||||||||:|||||||||||||
Human     8 QMELEEG-KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGS 71

  Fly    71 YVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDIND---------------------------VT 108
            ||||||:.|||||||||||||||||||:||||||||                           ||
Human    72 YVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVSVAGEVVVVVGSALTVPLLKLAPFTQVT 136

  Fly   109 PNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 173
            |||||||||:|||||||||||||||||||||||||||||||:|||||||||||||||||||||||
Human   137 PNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 201

  Fly   174 FDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 238
            |:|||||||||||||||||||||||||||||||:|||||||||||||||||||:|||||||||||
Human   202 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 266

  Fly   239 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 303
            |||||||||||||||||||:|.|||||||||||||||||||||||||||||||||||||||||.|
Human   267 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSA 331

  Fly   304 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 368
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Human   332 LLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 396

  Fly   369 ALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
            |||||||||||||||||||||||||||||||||||||
Human   397 ALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 364/412 (88%)
SlyX <27..>69 CDD:294687 36/41 (88%)
AAA_16 152..>205 CDD:289934 51/52 (98%)
AAA 185..317 CDD:278434 126/131 (96%)
PSMC5XP_024306608.1 RPT1 4..431 CDD:224143 368/423 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 254 1.000 Domainoid score I2074
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2098
Inparanoid 1 1.050 732 1.000 Inparanoid score I609
Isobase 1 0.950 - 0 Normalized mean entropy S42
OMA 1 1.010 - - QHG53670
OrthoDB 1 1.010 - - D298123at33208
OrthoFinder 1 1.000 - - FOG0003106
OrthoInspector 1 1.000 - - oto88742
orthoMCL 1 0.900 - - OOG6_101513
Panther 1 1.100 - - LDO PTHR23073
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1002
SonicParanoid 1 1.000 - - X2077
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

Return to query results.
Submit another query.