Protein Alignment Rpt6 and psmc6

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_989342.1
• Gene: psmc6 / 394968
• XenbaseID: XB-GENE-978099
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 356
• Identity: 179/356 - (50%)
• Similarity: 240/356 - (67%)
• Gaps: 2/356 - (0%)

  Fly    41 LRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDIN 105
            |:.|:.|..||..:......:|:.||..|..||||:|.:.::|.:||.....::||...:.:|..
 Frog    26 LKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKT 90

  Fly   106 DVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKH 170
            .:.|..||||...:.|:.:.||.:|||||..|..|...:.:|..:|||.:||:|::||||||:.:
 Frog    91 KLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTN 155

  Fly   171 PELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFV 235
            ||||..:||..|||.||||||||||||||||||...:|.|::|..|.:|.|:|||.:|::||:|.
 Frog   156 PELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFN 220

  Fly   236 MAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 300
            .||:|.|.||||||||:||..|...|:..|.|:|||::|||||:|||:....:|:||||||.|.|
 Frog   221 YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTL 285

  Fly   301 DPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 365
            |||||||||:||||....|||:|||||||||:..:.....|:...|.:|..|.:||:::.|||||
 Frog   286 DPALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350

  Fly   366 GMYALRERRVHVTQEDFEMAVAKVMQKDSEK 396
            ||:|:|..|..|.||||..||.||  .||:|
 Frog   351 GMFAIRADRDFVVQEDFMKAVRKV--ADSKK 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	179/356 (50%)
psmc6	NP_989342.1	PRK03992	5..379	CDD:179699	178/354 (50%)