DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rpt6 and Fggy

DIOPT Version :9

Sequence 1:	NP_608447.1	Gene:	Rpt6 / 33105	FlyBaseID:	FBgn0020369	Length:	405	Species:	Drosophila melanogaster
Sequence 2:	XP_038965462.1	Gene:	Fggy / 298250	RGDID:	1359429	Length:	558	Species:	Rattus norvegicus

Alignment Length:	266	Identity:	57/266 - (21%)
Similarity:	98/266 - (36%)	Gaps:	85/266 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   111 CRVALR-NESYTLHKILPNKVDPLVSLMMVEK----VP-----DSTYEMVGGLD----KQIKEIK 161
            |||... .:....|:|.....|...||::::|    :|     ||:..::..||    .|:..|.
  Rat    94 CRVTKEIVQGIDAHRIRGLGFDATCSLVVLDKEFHPLPVNREGDSSRNIIMWLDHRAVSQVHRIN 158

  Fly   162 E-----------VIELPVKHPELF----DALGIAQPKGVLLYGPP------GTGKTL--LARAVA 203
            |           |:.:.::.|:|.    :...|...|....:..|      .||.|.  |...|.
  Rat   159 ETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKATGVTARSLCSLVC 223

  Fly   204 HHT-------ECTFIRVSGSELVQKFIGE----------------GSRMVRELFVMARE-HAPSI 244
            ..|       :.:|.::.|   ::..||:                ||.::.|   .||| ..||.
  Rat   224 KWTYSAEKGWDDSFWKMIG---LEDLIGDNYNKIGNLVLPPGASLGSGLIPE---AARELGLPSG 282

  Fly   245 IFMDEIDSIGSSRIESGSGG----DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI---LDP 302
            |      ::.:|.|::.:||    .::|:...|    ..:|...|..:.||..|:...:   .||
  Rat   283 I------AVAASLIDAHAGGLGVIGADVRGHGL----TCEGQPVTSRLAVICGTSSCHMGISKDP 337

  Fly   303 ALLRPG 308
            ..: ||
  Rat   338 IFV-PG 342

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	RPT1	17..403	CDD:224143	57/266 (21%)
		SlyX	<27..>69	CDD:294687
		AAA_16	152..>205	CDD:289934	16/79 (20%)
		AAA	185..317	CDD:278434	35/163 (21%)
Fggy	XP_038965462.1	FGGY_YpCarbK_like	41..536	CDD:212663	57/266 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900